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Hi Chad,
Could an option be added whereby the LocusName is added to the snp_table.txt matrix? I'm attempting to analyse snps per fragment but the core_snps.txt can become massive!
The output I have in mind would look like this:
<style> </style>| genome1 | genome2 | genome3 | genome4 | ||
|---|---|---|---|---|---|
| LocusName1 | 4567 | A | T | C | G |
| LocusName1 | 10384 | A | T | C | G |
| LocusName2 | 12475 | A | T | - | G |
| LocusName2 | 14569 | - | G | C | G |
Thanks in advance for any help with this!
EDIT: I realise now that the positions are not included already. So it would be to add the LocusName's and positions. For my purposes the LocusName's alone would be sufficient
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