From e37114a0ba57b62326db33cf2a509945b81ecd43 Mon Sep 17 00:00:00 2001
From: chungongyu <chungongyu@gmail.com>
Date: Thu, 3 Jul 2025 17:48:02 +0800
Subject: [PATCH] refactor: README.md

---
 README.md | 12 ++++++------
 1 file changed, 6 insertions(+), 6 deletions(-)

diff --git a/README.md b/README.md
index c295374..dc26f77 100644
--- a/README.md
+++ b/README.md
@@ -20,16 +20,16 @@ This package provides an implementation of the inference pipeline of [ProTCR](ht
 1.  Clone this repository and `cd` into it.
 
   ```bash
-  $git clone https://github.com/bigict/tcr_pmhc.git
-  $cd tcr_pmhc
-  $git submodule update --init --remote
+  git clone https://github.com/bigict/tcr_pmhc.git
+  cd tcr_pmhc
+  git submodule update --init --remote
   ```
 
 2. Create conda an environment and activate it.
 
   ```bash
-  $conda create -n tcr python=3.11
-  $conda activate tcr
+  conda create -n tcr python=3.11
+  conda activate tcr
   ```
 
   You need to install the [ProFOLD2](https://github.com/bigict/ProFOLD2) dependencies
@@ -59,7 +59,7 @@ This package provides an implementation of the inference pipeline of [ProTCR](ht
   
   You can run
   ```bash
-  $predict.sh --help
+  predict.sh --help
   ```
   for further help.