diff --git a/README.md b/README.md index c295374..dc26f77 100644 --- a/README.md +++ b/README.md @@ -20,16 +20,16 @@ This package provides an implementation of the inference pipeline of [ProTCR](ht 1. Clone this repository and `cd` into it. ```bash - $git clone https://github.com/bigict/tcr_pmhc.git - $cd tcr_pmhc - $git submodule update --init --remote + git clone https://github.com/bigict/tcr_pmhc.git + cd tcr_pmhc + git submodule update --init --remote ``` 2. Create conda an environment and activate it. ```bash - $conda create -n tcr python=3.11 - $conda activate tcr + conda create -n tcr python=3.11 + conda activate tcr ``` You need to install the [ProFOLD2](https://github.com/bigict/ProFOLD2) dependencies @@ -59,7 +59,7 @@ This package provides an implementation of the inference pipeline of [ProTCR](ht You can run ```bash - $predict.sh --help + predict.sh --help ``` for further help.