Test if it works with the duplexome #161
Description
This pipeline has been developed with a focus on analyzing data from panels, but it could potentially be applied to any other scenario including exome, or even whole genome although the main interest would be in exonic regions probably.
It would be good that whenever we have the duplexome run finished we can test how deepCSA works with that and fix/optimize any new errors or runtime bottlenecks.
I expect that the annotation of the panel will be very slow, but can be easily parallelized, and many other steps that require the full panel to work with might be tricky to run.