diff --git a/error.csv b/error.csv index 1febafd..2921208 100644 --- a/error.csv +++ b/error.csv @@ -1,3 +1,3 @@ add.POSIXct,viz_owner_repo,error -2025-11-26T16:31:33.742225Z,tdhock/tdhock-figure-nnet-regression-degrees,Capture.PNG download returned 404: Not Found -2025-11-26T16:31:33.742225Z,tdhock/animint-figure-nnet-regression-degrees,plot.json file in gh-pages branch of tdhock/animint-figure-nnet-regression-degrees should have element named title which should be string describing the data viz +2025-12-19T10:20:16.493868Z,tdhock/tdhock-figure-nnet-regression-degrees,Capture.PNG download returned 404: Not Found +2025-12-19T10:20:16.493868Z,tdhock/animint-figure-nnet-regression-degrees,plot.json file in gh-pages branch of tdhock/animint-figure-nnet-regression-degrees should have element named title which should be string describing the data viz diff --git a/index.html b/index.html index 5415e27..a4f9cd9 100644 --- a/index.html +++ b/index.html @@ -293,7 +293,7 @@

animint2 gallery

align="left">repo source - + tdhock/Animated2GradCAM-COVID19-Chest-X-ray-ViT-V2-200px-696Case Classifying Covid19 chest X-ray images @@ -301,7 +301,7 @@

animint2 gallery

align="left">repo source - + tdhock/2023-12-27-train-sizes-classification Variable size train sets, classification @@ -310,7 +310,7 @@

animint2 gallery

source video - + ANAMASGARD/2023-12-26-train-sizes-regression Variable size train set, regression @@ -319,7 +319,7 @@

animint2 gallery

source video - + ANAMASGARD/2023-12-13-train-predict-subsets-classification SOAK algorithm: train/predict on subsets, @@ -329,7 +329,7 @@

animint2 gallery

source video - + tdhock/2023-12-13-train-predict-subsets-regression SOAK algorithm: train/predict on subsets, @@ -339,7 +339,7 @@

animint2 gallery

source video - + tdhock/2025-09-22-degree-neighbors-table Overfitting using linear model polynomial degree and @@ -348,7 +348,7 @@

animint2 gallery

align="left">repo source - + tdhock/2023-12-04-degree-neighbors Overfitting using linear model polynomial degree and @@ -357,7 +357,7 @@

animint2 gallery

align="left">repo source - + tdhock/2023-12-04-capacity-polynomial-degree-several-patterns Overfitting using linear model polynomial degree, @@ -366,7 +366,7 @@

animint2 gallery

align="left">repo source - + tdhock/2020-02-03-capacity-polynomial-degree Overfitting using linear model polynomial degree @@ -375,7 +375,7 @@

animint2 gallery

source video - + tdhock/2023-11-21-auc-improved Initial/optimized AUM/AUC for change-point @@ -384,7 +384,7 @@

animint2 gallery

align="left">repo source - + tdhock/2020-02-13-variable-importance-Sugar-Maple Sugar Maple accuracy and variable selection @@ -392,7 +392,7 @@

animint2 gallery

align="left">repo source - + tdhock/2020-02-13-variable-importance-Table-Mountain-Pine Table Mountain Pine accuracy and variable @@ -401,7 +401,7 @@

animint2 gallery

align="left">repo source - + tdhock/2020-02-13-roc-vs-error-Sugar-Maple Sugar Maple ROC curves and error/accuracy metrics @@ -409,7 +409,7 @@

animint2 gallery

align="left">repo source - + tdhock/2020-02-13-roc-vs-error-Table-Mountain-Pine Table Mountain Pine ROC curves and error/accuracy @@ -418,7 +418,7 @@

animint2 gallery

align="left">repo source - + tdhock/2019-02-14-L2-regularization L2-regularized (Ridge) least squares linear @@ -427,7 +427,7 @@

animint2 gallery

align="left">repo source - + tdhock/2019-02-05-linear-regression-1d-grad-desc-ozone-steps Gradient descent with several step sizes for 1d linear @@ -436,7 +436,7 @@

animint2 gallery

align="left">repo source - + tdhock/2019-02-05-linear-regression-1d-grad-desc-ozone Gradient descent for 1d linear regression in ozone @@ -445,7 +445,7 @@

animint2 gallery

align="left">repo source - + tdhock/2019-01-nearest-neighbor-regression-one-split Nearest neighbors algorithm for regression @@ -453,7 +453,7 @@

animint2 gallery

align="left">repo source - + tdhock/2023-01-regression-2d Nearest neighbors for regression with 2D inputs @@ -461,7 +461,7 @@

animint2 gallery

align="left">repo source - + tdhock/2019-01-nearest-neighbors-classification-1d Nearest neighbors algorithm for classification @@ -469,7 +469,7 @@

animint2 gallery

align="left">repo source - + tdhock/2019-01-nearest-neighbors-cross-validation 4 fold cross-validation @@ -477,7 +477,7 @@

animint2 gallery

align="left">repo source - + tdhock/2023-11-interval-regression-differences AIC/BIC change-point detection comparison using ROC @@ -486,7 +486,7 @@

animint2 gallery

align="left">repo source - + tdhock/necromass-figure-one-network bacteria_fungi_conservative visualization @@ -494,7 +494,7 @@

animint2 gallery

align="left">repo source - + EngineerDanny/EngineerDanny-necromass-figure-one-network bacteria_fungi_conservative visualization @@ -502,7 +502,7 @@

animint2 gallery

align="left">repo source - + ANAMASGARD/breakpoints breakpoints select multiple segmentation models @@ -510,7 +510,7 @@

animint2 gallery

align="left">repo source - + suhaani-agarwal/tornado-visualization US Tornado Visualization @@ -519,7 +519,7 @@

animint2 gallery

source video - + suhaani-agarwal/central-american-temperature-maps Central American Temperature Maps @@ -528,7 +528,7 @@

animint2 gallery

source video - + suhaani-agarwal/WorldBank-paper World Bank data viz for Animint paper @@ -537,7 +537,7 @@

animint2 gallery

source video - + suhaani-agarwal/chip-seq-unaligned ChIP-seq Unaligned @@ -546,7 +546,7 @@

animint2 gallery

source video - + suhaani-agarwal/montreal-bikes-Jan2016 Montreal cyclists and accidents, 2009-2014 @@ -555,7 +555,7 @@

animint2 gallery

source video - + suhaani-agarwal/Demo_Constrained_PDPA Demo of Constrained Pruned Dynamic Programming @@ -564,7 +564,7 @@

animint2 gallery

align="left">repo source - + suhaani-agarwal/figure-penaltyLearning Cost/slack minimization over all feature thresholds, @@ -573,7 +573,7 @@

animint2 gallery

align="left">repo source - + suhaani-agarwal/intreg-BIC Segmentation model selection with BIC @@ -581,7 +581,7 @@

animint2 gallery

align="left">repo source - + suhaani-agarwal/Ch18-neural-networks-sim Gradient descent for neural network and linear @@ -590,7 +590,7 @@

animint2 gallery

align="left">repo source - + suhaani-agarwal/figure-gradient-descent-regression Gradient descent for regression @@ -598,15 +598,15 @@

animint2 gallery

align="left">repo source - + biplab-sutradhar/climate-change-sensor-stations -Climate change sensor stations +CRUTEM4 Temperature Sensor Stations repo -source +source - + tdhock/2025-08-29-LOPART-candidates-grid Labeled optimal partitioning (LOPART) algorithm for @@ -615,7 +615,7 @@

animint2 gallery

align="left">repo source - + biplab-sutradhar/Data-viz-with-206-selectors Animint compiler with for loops @@ -623,7 +623,7 @@

animint2 gallery

align="left">repo source - + suhaani-agarwal/ROC-curve-alignment Changepoint detection ROC curve alignment problem @@ -631,7 +631,7 @@

animint2 gallery

align="left">repo source - + suhaani-agarwal/figure-loss-small-data Changepoint model selection @@ -639,7 +639,7 @@

animint2 gallery

align="left">repo source - + ANAMASGARD/dna-copy-number-large-margin Max-margin interval regression for supervised @@ -648,6 +648,15 @@

animint2 gallery

align="left">repo source + +ANAMASGARD/chip-seq-large-margin +Max-margin supervised penalty learning for peak +detection in ChIP-seq data +repo +source +

Download this table: meta.csv

diff --git a/meta.csv b/meta.csv index 9167d24..c2573e7 100644 --- a/meta.csv +++ b/meta.csv @@ -46,9 +46,10 @@ add.POSIXct,viz_owner_repo,video,source,title 2025-05-27T08:01:05.116130Z,suhaani-agarwal/intreg-BIC,"",https://github.com/suhaani-agarwal/animint/blob/master/inst/examples/intreg_BIC.R,Segmentation model selection with BIC 2025-05-27T11:22:32.142369Z,suhaani-agarwal/Ch18-neural-networks-sim,"",https://github.com/suhaani-agarwal/animint-book/blob/master/Ch18-neural-networks-sim.R,Gradient descent for neural network and linear model 2025-05-27T11:50:29.187449Z,suhaani-agarwal/figure-gradient-descent-regression,"",https://github.com/suhaani-agarwal/cs570-spring-2022/blob/master/figure-gradient-descent-regression.R,Gradient descent for regression -2025-06-23T04:40:48.175167Z,biplab-sutradhar/climate-change-sensor-stations,"",https://github.com/biplab-sutradhar/climate-change-sensor-stations/blob/gh-pages/figure-stations.R,Climate change sensor stations +2025-06-23T04:40:48.175167Z,biplab-sutradhar/climate-change-sensor-stations,"",https://github.com/biplab-sutradhar/climate-change-sensor-stations/blob/main/figure-stations.R,CRUTEM4 Temperature Sensor Stations 2025-08-29T13:23:46.091420Z,tdhock/2025-08-29-LOPART-candidates-grid,"",https://github.com/tdhock/LOPART-paper/blob/master/figure-candidates-interactive.R,Labeled optimal partitioning (LOPART) algorithm for change-point detection with label constraints 2025-08-26T07:19:01.288519Z,biplab-sutradhar/Data-viz-with-206-selectors,"",https://github.com/biplab-sutradhar/Data-viz-with-206-selectors/blob/gh-pages/PSJ.R,Animint compiler with for loops 2025-06-18T08:46:23.746985Z,suhaani-agarwal/ROC-curve-alignment,"",https://github.com/suhaani-agarwal/max-generalized-auc/blob/master/figure-curveAlignment.R,Changepoint detection ROC curve alignment problem 2025-08-25T13:41:41.008040Z,suhaani-agarwal/figure-loss-small-data,"",https://github.com/tdhock/changepoint-data-structure/blob/master/figure-loss-small-data.R,Changepoint model selection -2025-11-15T15:24:19.490278Z,ANAMASGARD/dna-copy-number-large-margin,"",https://github.com/ANAMASGARD/dna-copy-number-viz-code/blob/main/intreg.R,Max-margin interval regression for supervised segmentation model selection \ No newline at end of file +2025-11-15T15:24:19.490278Z,ANAMASGARD/dna-copy-number-large-margin,"",https://github.com/ANAMASGARD/dna-copy-number-viz-code/blob/main/intreg.R,Max-margin interval regression for supervised segmentation model selection +2025-12-08T15:39:28.834598Z,ANAMASGARD/chip-seq-large-margin,"",https://github.com/ANAMASGARD/chip-seq-large-margin-code/blob/main/chip-seq-large-margin.R,Max-margin supervised penalty learning for peak detection in ChIP-seq data \ No newline at end of file diff --git a/repos.txt b/repos.txt index 2e51a42..ead2e75 100644 --- a/repos.txt +++ b/repos.txt @@ -53,3 +53,4 @@ biplab-sutradhar/Data-viz-with-206-selectors suhaani-agarwal/ROC-curve-alignment suhaani-agarwal/figure-loss-small-data ANAMASGARD/dna-copy-number-large-margin +ANAMASGARD/chip-seq-large-margin diff --git a/repos/ANAMASGARD/chip-seq-large-margin.png b/repos/ANAMASGARD/chip-seq-large-margin.png new file mode 100644 index 0000000..4f953c7 Binary files /dev/null and b/repos/ANAMASGARD/chip-seq-large-margin.png differ