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It seems sally can only parse examples from /test/regess/*.
Whenever running the mcmt cases from the examples folder, I got the following information:
Parse error: ../../examples/honeywell/Ex3.mcmt:28:20:
And the sal cases returned
src/parser/sal/sal_state.cpp:620: sally::expr::term_ref sally::parser::sal_state::mk_term_from_guarded(sally::expr::term_ref, const std::vector<sally::expr::term_ref>&): Assertion false 'failed'. Aborted (core dumped)