Getting SD4SOLPS running on omega.gat.com

[eldond]

Don't use julia v1.10.1 on omega; it has a certificate problem and can't update its registry. v1.10.0 works. To change versions:

juliaup add 1.10.0
juliaup default 1.10.0

1. First, follow steps 1-8 of the instructions for getting started with FUSE on the OMEGA cluster but change the path from /fusion/ga/projects/ird/ptp/ to /fusion/projects/sparc/detach_ctrl/. The end of the path from $USER onward can stay the same. Instead of being added to the ptp group, you should be added to the sparc_detach_ctrl group.
   

2. Clone the SD4SOLPS repos. Setting up SSH keys with GitHub is needed for this.

git clone git@github.com/JuliaFusion/EFIT.jl EFIT
git clone git@github.com:ProjectTorreyPines/OMAS.jl OMAS
git clone git@github.com:ProjectTorreyPines/GGDUtils.jl GGDUtils
git clone git@github.com:ProjectTorreyPines/SOLPS2IMAS.jl SOLPS2IMAS
git clone git@github.com:ProjectTorreyPines/SynthDiag.jl SynthDiag
git clone git@github.com:ProjectTorreyPines/SD4SOLPS.jl SD4SOLPS

4. Register the cloned projects with julia. For each REPO in EFIT, OMAS, GGDUtils, SOLPS2IMAS, SynthDiag, SD4SOLPS (the order matters):

cd <REPO>
julia
] dev .

5. Add other dependencies in julia

] add YAML
] add Plots
] add Unitful
] add Interpolations
] add ArgParse

6. Clone the samples with dvc so the tests will run. For each in GGDUtils/samples, SynthDiag/samples, SOLPS2IMAS/samples, SD4SOLPS/samples

/fusion/projects/sparc/detach_ctrl/$USER/miniconda3/bin/conda install -c conda-forge dvc
/fusion/projects/sparc/detach_ctrl/$USER/miniconda3/bin/conda install -c conda-forge dvc-ssh  # In both of these, I'm not sure if `-c conda-forge` is needed.
cd <path that has dvc samples>
dvc pull

7. Run tests. In each path of EFIT, OMAS, GGDUtils, SOLPS2IMAS, SynthDiag, SD4SOLPS:

cd path
julia
using Revise
include("test/runtests.jl")

and it should work. Using Revise is not required at this stage but it's probably a habit that will save headaches later, so you might as well get started now.

[orso82]

@eldond please note that only people with access to the FUSE repo (which I remind you is IR&D) have access to the fuse.help website.

[eldond]

@eldond please note that only people with access to the FUSE repo (which I remind you is IR&D) have access to the fuse.help website.

oh, bother. Okay, I'll put a screenshot then. Thanks.

[eldond]

@orso82 @dautt-silva @bclyons12 @anchal-physics I got all the tests (in SD4SOLPS, SOLPS2IMAS, ...) to pass on omega using this procedure.