From b56a6e10891cd16aef2dc8b45adf689a1bdd548c Mon Sep 17 00:00:00 2001 From: bw2 Date: Sun, 24 Feb 2019 21:01:03 -0500 Subject: [PATCH] convert to zero-based coords --- scripts/TRFdat_to_bed.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/scripts/TRFdat_to_bed.py b/scripts/TRFdat_to_bed.py index ca90a22..7861806 100644 --- a/scripts/TRFdat_to_bed.py +++ b/scripts/TRFdat_to_bed.py @@ -35,7 +35,7 @@ def main(): int(splitline[0]) except ValueError: continue - start = splitline[0] + start = str(int(splitline[0]) - 1) end = splitline[1] motif = splitline[13] copynum = splitline[3]