diff --git a/readme.html b/README.md similarity index 56% rename from readme.html rename to README.md index fb03be4..a9cd694 100644 --- a/readme.html +++ b/README.md @@ -1,44 +1,41 @@ -
-
-This model of cardiac sarcomere dynamics linked to calcium kinetics is implemented and
+This model of cardiac sarcomere dynamics linked to calcium kinetics is implemented and 
 modified for Neuron by Francois E. Gannier and Claire O. Malecot 
-	from University of Tours - FRANCE
-	Physiologie des Cellules Cardiaques et Vasculaires
-	email address: francois.gannier@univ-tours.fr
+from University of Tours - FRANCE 
+Physiologie des Cellules Cardiaques et Vasculaires  
+email address: francois.gannier@univ-tours.fr  
 
-It is based on the paper by :
+It is based on the paper by :  
 Negroni JA & Lascano EC (1996) A cardiac muscle model relating sarcomere 
-dynamics to calcium kinetics. J Mol Cell Cardio 28:915-929 [PubMed]
+dynamics to calcium kinetics. *J Mol Cell Cardio* 28:915-929 [ [PubMed](http://www.ncbi.nlm.nih.gov/pubmed/8762031) ]
 
 this is a now classic model of contraction which has been added in some recent models 
 (eg : kyoto model (2003), Okada model (2005))
 
-it uses a four-state combination to show the relation between C-Troponin, calcium,
+it uses a four-state combination to show the relation between C-Troponin, calcium, 
 cross-bridges and Force.
 
-The orginal model was modified to allow several stimuli with self-chosen frequency.
+The orginal model was modified to allow several stimuli with self-chosen frequency. 
 (This allows to reproduce a staircase phenomenom)
  
-To run the simulation auto-launch the model from modeldb or download
+To run the simulation auto-launch the model from modeldb or download 
 and extract the archive and then compile the mod files under:
 
-unix/linux:
------------
-type nrnivmodl in the NegroniLascano folder and then
-nrngui mosinit.hoc
-
-mswin:
-------
-run mknrndll and then double click on mosinit.hoc
+## unix/linux:
+type `nrnivmodl` in the NegroniLascano folder and then 
+`nrngui mosinit.hoc`
 
-MAC OS X:
---------
+## mswin:
+run `mknrndll` and then double click on `mosinit.hoc`
 
-Drag and drop the NegroniLascano folder onto the mknrndll icon.  Drag
+## MAC OS X:
+Drag and drop the NegroniLascano folder onto the mknrndll icon. Drag 
 and drop the mosinit.hoc file onto the nrngui icon.
 
 Once the simulation starts it recreates a figure similar to Fig. 2 (shown as three 
-panels for clarity)& 3 of the original paper.
+panels for clarity) & 3 of the original paper.
+
+![Figure 2 & 3](./fig2-3.jpg)
+
+---
 
-Figure 2 & 3
-
\ No newline at end of file +2025-06-02: Converted README to Markdown.