diff --git a/.flake8 b/.flake8 deleted file mode 100644 index 9c24de21..00000000 --- a/.flake8 +++ /dev/null @@ -1,5 +0,0 @@ -[flake8] -ignore = E203, E266, E501, W503 -max-line-length = 80 -max-complexity = 16 -select = B,C,E,F,W,T4,B9 diff --git a/.gitattributes b/.gitattributes index ea3eec13..c6837388 100644 --- a/.gitattributes +++ b/.gitattributes @@ -4,3 +4,6 @@ *.zip filter=lfs diff=lfs merge=lfs -text *.min.js filter=lfs diff=lfs merge=lfs -text *.npy filter=lfs diff=lfs merge=lfs -text + +# SCM syntax highlighting & preventing 3-way merges +pixi.lock merge=binary linguist-language=YAML linguist-generated=true diff --git a/.github/workflows/python_analysis.yml b/.github/workflows/python_analysis.yml index d04b0b7a..29f2e0a7 100644 --- a/.github/workflows/python_analysis.yml +++ b/.github/workflows/python_analysis.yml @@ -31,7 +31,7 @@ jobs: contents: read pull-requests: read with: - package-manager: 'conda' + package-manager: 'pixi' app-name: 'simpeg_drivers' python-version: '3.10' call-workflow-pytest: @@ -41,7 +41,7 @@ jobs: contents: read pull-requests: read with: - package-manager: 'conda' + package-manager: 'pixi' python-versions: '["3.10", "3.11", "3.12"]' os: '["ubuntu-latest", "windows-latest"]' cache-number: 1 diff --git a/.github/workflows/security_scan.yml b/.github/workflows/security_scan.yml index 0060b34d..5390938a 100644 --- a/.github/workflows/security_scan.yml +++ b/.github/workflows/security_scan.yml @@ -25,19 +25,19 @@ concurrency: jobs: call-workflow-zizmor-annotate: - name: Zizmor analysis (advanced security) - if: ${{ github.event_name != 'pull_request' }} + name: Zizmor analysis (annotate) + if: ${{ github.event_name == 'pull_request' }} permissions: - security-events: write + checks: write contents: read actions: read - uses: MiraGeoscience/CI-tools/.github/workflows/reusable-zizmor-advanced-security.yml@v2 + uses: MiraGeoscience/CI-tools/.github/workflows/reusable-zizmor-annotate.yml@v2 call-workflow-zizmor-advanced-security: - name: Zizmor analysis (annotate) - if: ${{ github.event_name == 'pull_request' }} + name: Zizmor analysis (advanced security) + if: ${{ github.event_name != 'pull_request' }} permissions: - checks: write + security-events: write contents: read actions: read - uses: MiraGeoscience/CI-tools/.github/workflows/reusable-zizmor-annotate.yml@v2 + uses: MiraGeoscience/CI-tools/.github/workflows/reusable-zizmor-advanced-security.yml@v2 diff --git a/.gitignore b/.gitignore index 5cb6fcc4..25f1f568 100644 --- a/.gitignore +++ b/.gitignore @@ -73,6 +73,8 @@ instance/ # Sphinx documentation docs/_build/ +# conf.py is generated by jupyter-book +docs/conf.py # PyBuilder target/ @@ -142,8 +144,15 @@ dmypy.json # geoh5 locks *.geoh5.lock -# tempory generated files -pyproject-sha.toml +# not using poetry to lock, but pixi +poetry.lock -#version ignore +# auto-generated version file simpeg_drivers/_version.py +/_version.json + +# not using poetry to lock, but pixi +poetry.lock + +# generated conda env files by pixi +*.pixi.conda.yml diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml index ef349d55..223d0e4c 100644 --- a/.pre-commit-config.yaml +++ b/.pre-commit-config.yaml @@ -1,115 +1,116 @@ - default_language_version: - python: python3 + python: python3 exclude: ^docs/(conf.py|_ext/) default_stages: [pre-commit,pre-push] fail_fast: false ci: - skip: [pylint] - autoupdate_branch: develop - autoupdate_schedule: monthly + skip: [pylint] + autoupdate_branch: develop + autoupdate_schedule: monthly repos: -# - repo: https://github.com/python-poetry/poetry # TODO: re-enable with pixi (does not support source=pypi) -# rev: 2.2.1 -# hooks: -# - id: poetry-check -# args: [--no-plugins] -- repo: https://github.com/hadialqattan/pycln - rev: v2.6.0 - hooks: - - id: pycln - args: [--config=pyproject.toml] -- repo: https://github.com/astral-sh/ruff-pre-commit - rev: v0.14.4 - hooks: - - id: ruff-check - args: - - --fix - - --exit-non-zero-on-fix -# - --unsafe-fixes - - id: ruff-format -# - repo: https://github.com/pre-commit/mirrors-mypy # TODO: fix mypy errors -# rev: v1.18.2 -# hooks: -# - id: mypy -# additional_dependencies: [ -# numpy==1.26.*, -# types-toml, -# types-PyYAML, -# tomli # to read config from pyproject.toml -# ] -# exclude: ^(docs|simpeg_drivers-assets)/ -- repo: https://github.com/codingjoe/relint - rev: 3.3.1 - hooks: - - id: relint - args: [-W] # to fail on warnings -- repo: https://github.com/MiraGeoscience/pre-commit-hooks - rev: v1.1.0 - hooks: - - id: check-copyright - files: (^package\.rst|LICENSE|^README(|-dev).rst|^docs/intro\.md|\.py|\.pyi)$ - exclude: (^\.|^docs/(?!intro\.md)) - args: - - --full-scan-files - - intro.md - - id: prepare-commit-msg - - id: check-commit-msg -- repo: local - hooks: - - id: pylint - name: pylint - entry: .\\devtools\\conda_env_pylint.bat - language: system - require_serial: true # pylint does its own parallelism - types: [python] - exclude: ^(devtools|docs)/ -- repo: https://github.com/codespell-project/codespell - rev: v2.4.1 - hooks: - - id: codespell - exclude: (-lock\.ya?ml|\benvironments/.*\.ya?ml|\.ipynb|^THIRD_PARTY_SOFTWARE\.rst)$ - entry: codespell -I .codespellignore -- repo: https://github.com/pre-commit/pre-commit-hooks - rev: v6.0.0 - hooks: - - id: trailing-whitespace - exclude: \.mdj$ - - id: check-json - exclude_types: [jupyter] - - id: check-toml - - id: check-yaml - - id: check-added-large-files - exclude: (\.ipynb)$ - - id: check-case-conflict - - id: check-merge-conflict - - id: debug-statements - - id: detect-private-key - - id: end-of-file-fixer - exclude: (^\.idea/.*\.xml|\.mdj)$ - - id: mixed-line-ending - exclude: ^\.idea/.*\.xml$ - - id: name-tests-test - exclude: ^tests/utils/ - - id: pretty-format-json - args: - - --autofix - - --indent=4 - - --no-sort-keys - - --top-keys - - version,title,icon,documentation,conda_environment,run_command,geoh5,monitoring_directory,workspace_geoh5 - exclude_types: [jupyter] - exclude: ^docs/(.*/)?images/ -- repo: https://github.com/rstcheck/rstcheck - rev: v6.2.5 - hooks: - - id: rstcheck - exclude: ^THIRD_PARTY_SOFTWARE.rst$ - additional_dependencies: [sphinx] -- repo: https://github.com/pre-commit/pygrep-hooks - rev: v1.10.0 - hooks: - - id: rst-backticks - exclude: ^THIRD_PARTY_SOFTWARE.rst$ +- repo: https://github.com/python-poetry/poetry + rev: 2.2.1 + hooks: + - id: poetry-check + args: [--no-plugins] +- repo: https://github.com/hadialqattan/pycln + rev: v2.6.0 + hooks: + - id: pycln + args: [ --config=pyproject.toml ] +- repo: https://github.com/astral-sh/ruff-pre-commit + rev: v0.14.10 + hooks: + - id: ruff-check + args: + - --fix + - --exit-non-zero-on-fix + # - --unsafe-fixes + - id: ruff-format +# - repo: https://github.com/pre-commit/mirrors-mypy # TODO: fix mypy errors +# rev: v1.19.1 +# hooks: +# - id: mypy +# additional_dependencies: [ +# numpy==1.26.*, +# types-toml, +# types-PyYAML, +# tomli, # to read config from pyproject.toml +# ] +# exclude: ^(docs|simpeg_drivers-assets)/ +- repo: https://github.com/codingjoe/relint + rev: 3.3.1 + hooks: + - id: relint + args: [-W] # to fail on warnings +- repo: https://github.com/MiraGeoscience/pre-commit-hooks + rev: v1.1.0 + hooks: + - id: check-copyright + files: (^package\.rst|^LICENSE|^README(|-dev).rst|^docs/intro\.md|\.py|\.pyi)$ + exclude: (^\.|^docs/(?!intro\.md)) + args: + - --full-scan-files + - intro.md + - id: prepare-commit-msg + - id: check-commit-msg +- repo: local + hooks: + - id: pylint + name: pylint + entry: pixi run -e linter --as-is lint + language: system + require_serial: true # pylint does its own parallelism + types: [text] + types_or: [python, pyi] + exclude: ^(devtools|docs|simpeg_drivers-assets)/ +- repo: https://github.com/codespell-project/codespell + rev: v2.4.1 + hooks: + - id: codespell + exclude: (\.ipynb|THIRD_PARTY_SOFTWARE\.rst|^pixi\.lock)$ + entry: codespell -I .codespellignore +- repo: https://github.com/pre-commit/pre-commit-hooks + rev: v6.0.0 + hooks: + - id: trailing-whitespace + exclude: \.mdj$ + - id: check-json + exclude_types: [jupyter] + - id: check-toml + - id: check-yaml + - id: check-added-large-files + exclude: (\.ipynb)$ + # args: [--enforce-all] + - id: check-case-conflict + - id: check-merge-conflict + - id: debug-statements + - id: detect-private-key + - id: end-of-file-fixer + exclude: (^\.idea/.*\.xml|\.mdj)$ + - id: mixed-line-ending + exclude: ^\.idea/.*\.xml$ + - id: name-tests-test + exclude: ^tests/utils/ + - id: pretty-format-json + args: + - --autofix + - --indent=4 + - --no-sort-keys + - --top-keys + - version,title,icon,documentation,conda_environment,run_command,geoh5,monitoring_directory,workspace_geoh5 + exclude_types: [jupyter] + exclude: ^docs/(.*/)?images/ +- repo: https://github.com/rstcheck/rstcheck + rev: v6.2.5 + hooks: + - id: rstcheck + exclude: ^THIRD_PARTY_SOFTWARE.rst$ + additional_dependencies: [sphinx] +- repo: https://github.com/pre-commit/pygrep-hooks + rev: v1.10.0 + hooks: + - id: rst-backticks + exclude: ^THIRD_PARTY_SOFTWARE.rst$ diff --git a/.readthedocs.yml b/.readthedocs.yml index eebdf2c0..63932a35 100644 --- a/.readthedocs.yml +++ b/.readthedocs.yml @@ -1,35 +1,37 @@ version: 2 -# Set the version of Python and other tools you might need build: - os: ubuntu-22.04 + os: ubuntu-24.04 tools: - python: "mambaforge-22.9" + python: "3.10" # pre-install for the py310 environment of pixi jobs: post_checkout: - # Download and uncompress the binary - # https://git-lfs.github.com/ - - wget https://github.com/git-lfs/git-lfs/releases/download/v3.1.4/git-lfs-linux-amd64-v3.1.4.tar.gz - - tar xvfz git-lfs-linux-amd64-v3.1.4.tar.gz + # Download and uncompress binary for the desired version of Git LFS + - | + set -e + LFS_VERSION="3.4.0" + wget "https://github.com/git-lfs/git-lfs/releases/download/v${LFS_VERSION}/git-lfs-linux-amd64-v${LFS_VERSION}.tar.gz" + tar xzf "git-lfs-linux-amd64-v${LFS_VERSION}.tar.gz" --strip-components=1 "git-lfs-${LFS_VERSION}/git-lfs" + rm "git-lfs-linux-amd64-v${LFS_VERSION}.tar.gz" # Modify LFS config paths to point where git-lfs binary was downloaded - - git config filter.lfs.process "`pwd`/git-lfs filter-process" - - git config filter.lfs.smudge "`pwd`/git-lfs smudge -- %f" - - git config filter.lfs.clean "`pwd`/git-lfs clean -- %f" + - git config filter.lfs.process "$(pwd)/git-lfs filter-process" + - git config filter.lfs.smudge "$(pwd)/git-lfs smudge -- %f" + - git config filter.lfs.clean "$(pwd)/git-lfs clean -- %f" # Make LFS available in current repository - ./git-lfs install # Download content from remote - ./git-lfs fetch # Make local files to have the real content on them - ./git-lfs checkout - pre_build: - # Generate on-the-fly Sphinx configuration from Jupyter Book's _config.yml - - "jupyter-book config sphinx docs/" - - "pip install . --no-deps" -sphinx: - builder: html - configuration: docs/conf.py - fail_on_warning: false + create_environment: + - asdf plugin add pixi + - asdf install pixi latest + - asdf global pixi latest -conda: - environment: docs/environment.yml + install: + - pixi install -e docs + + build: + html: + - pixi run --frozen -e docs build-docs html $READTHEDOCS_OUTPUT diff --git a/deps-lock-config.yaml b/deps-lock-config.yaml deleted file mode 100644 index 0ee84c55..00000000 --- a/deps-lock-config.yaml +++ /dev/null @@ -1,5 +0,0 @@ -include_dev: True -py_versions: - - "3.10" - - "3.11" - - "3.12" diff --git a/devtools/conda_env_pylint.bat b/devtools/conda_env_pylint.bat deleted file mode 100644 index 705f0d96..00000000 --- a/devtools/conda_env_pylint.bat +++ /dev/null @@ -1,11 +0,0 @@ -@echo off -setlocal EnableDelayedExpansion - -set project_dir=%~dp0.. -call %project_dir%\get_conda_exec.bat -if !errorlevel! neq 0 ( - exit /B !errorlevel! -) - -set env_path=%project_dir%\.conda-env -call !MY_CONDA_EXE! run -p %env_path% pylint %* diff --git a/docs/THIRD_PARTY_SOFTWARE.rst b/docs/THIRD_PARTY_SOFTWARE.rst index 75e658dd..1066c930 100644 --- a/docs/THIRD_PARTY_SOFTWARE.rst +++ b/docs/THIRD_PARTY_SOFTWARE.rst @@ -17,9 +17,15 @@ compatibly licensed. We list these here. * - `discretize `_ - MIT - Discretization tools for finite volume and inverse problems + * - `geoapps-utils `_ + - MIT + - Collection of utilities for creating applications and manipulating geoh5 objects * - `geoh5py `_ - LGPL-3.0-or-later - Python API for geoh5, an open file format for geoscientific data + * - `grid-apps `_ + - MIT + - Grid creation and manipulation using GEOH5 format. * - `numpy `_ - BSD-3-Clause - Fundamental package for array computing in Python @@ -32,6 +38,9 @@ compatibly licensed. We list these here. * - `pymatsolver `_ - MIT - Matrix Solvers for Python. + * - `Rtree `_ + - MIT + - Spatial index for Python GIS * - `scikit-learn `_ - BSD-3-Clause - A set of python modules for machine learning and data mining @@ -41,6 +50,12 @@ compatibly licensed. We list these here. * - `simpeg `_ - MIT - SimPEG: Simulation and Parameter Estimation in Geophysics + * - `threadpoolctl `_ + - BSD-3-Clause + - helpers to limit the number of threads used in the threadpool-backed of common native libraries used for scientific computing and data science * - `tqdm `_ - MPL-2.0 or MIT - A Fast, Extensible Progress Bar for Python and CLI + * - `trimesh `_ + - MIT + - Python library for loading and using triangular meshes diff --git a/docs/_config.yml b/docs/_config.yml index 13814dbb..73787c55 100644 --- a/docs/_config.yml +++ b/docs/_config.yml @@ -2,14 +2,49 @@ # Learn more at https://jupyterbook.org/customize/config.html title: Simpeg-Drivers - Geophysical Inversion with ANALYST -author: Mira Geoscience logo: images/GA-Python_2.png +author: Mira Geoscience Ltd. +copyright: "2025" # Force re-execution of notebooks on each build. # See https://jupyterbook.org/content/execute.html execute: execute_notebooks: auto exclude_patterns: [case_studies/Forrestania/python_code/*,] + run_in_temp: true + +sphinx: + extra_extensions: + - sphinx.ext.autodoc + - sphinx.ext.intersphinx + - sphinx.ext.todo + - sphinx_issues + - sphinxcontrib.googleanalytics + local_extensions: + dynamic_config: _ext/ + recursive_update: true + config: + project: simpeg-drivers + html_static_path: + - _static/custom.css + html_theme: alabaster + autodoc_typehints: signature + autodoc_typehints_format: short + suppress_warnings: + - etoc.toctree + intersphinx_mapping: + # use None to auto‑fetch objects.inv + numpy: + - https://numpy.org/doc/1.26/ + - null + python: + - https://docs.python.org/3/ + - null + todo_include_todos: true + issues_github_path: mirageoscience/simpeg-drivers + autodoc_type_aliases: + np.ndarray: numpy.ndarray + UUID: uuid.UUID # Define the name of the latex output file for PDF builds latex: @@ -23,11 +58,10 @@ bibtex_bibfiles: bibtex_reference_style: - author_year -# Information about where the book exists on the web repository: - url: https://github.com/executablebooks/jupyter-book # Online location of your book - path_to_book: docs # Optional path to your book, relative to the repository root - branch: master # Which branch of the repository should be used when creating links (optional) + url: https://github.com/MiraGeoscience/simpeg-drivers + path_to_book: docs + branch: main # Add GitHub buttons to your book # See https://jupyterbook.org/customize/config.html#add-a-link-to-your-repository diff --git a/docs/_ext/dynamic_config.py b/docs/_ext/dynamic_config.py new file mode 100644 index 00000000..b6d8c60e --- /dev/null +++ b/docs/_ext/dynamic_config.py @@ -0,0 +1,37 @@ +import logging +import os + +from datetime import datetime +from importlib.metadata import version as get_version +from packaging.version import Version + + +dated_copyright = f"{datetime.now().strftime('%Y, Mira Geoscience Ltd')}" + +def get_copyright_notice(): + return f"Copyright {dated_copyright}." + + +def setup(app): + # The full version, including alpha/beta/rc tags. + release = get_version("simpeg-drivers") + # The shorter X.Y.Z version. + version = Version(release).base_version + + app.config.project_copyright = f"{dated_copyright}" + app.config.release = release + app.config.version = version + app.config.html_theme_options = { + "description": f"version {release}", + "fixed_sidebar": True, + "logo_name": "Simpeg Drivers", + "show_relbars": True, + } + app.config.rst_epilog = f"\n.. |copyright_notice| replace:: {get_copyright_notice()}\n" + + app.config.googleanalytics_id = os.environ.get("GOOGLE_ANALYTICS_ID", "") + if not app.config.googleanalytics_id: + logging.warning("Environment variable GOOGLE_ANALYTICS_ID is not set") + app.config.googleanalytics_enabled = False + + return {"version": "0.1", "parallel_read_safe": True} diff --git a/docs/_static/custom.css b/docs/_static/custom.css new file mode 100644 index 00000000..359635e2 --- /dev/null +++ b/docs/_static/custom.css @@ -0,0 +1,737 @@ +@import url("alabaster.css"); + +/* -- page layout ----------------------------------------------------------- */ + +body { + font-family: Arial; + font-size: 16px; + background-color: #ffffff; + color: #000; + display: flex; + flex-direction: column; + min-height: 100vh; + text-align: justify; +} + +div.document { + width: 1000px; + margin: 0 auto; +} + +div.documentwrapper { + padding: 0; +} + +div.bodywrapper { + padding: 0; +} + +div.sphinxsidebar { + width: 250px; + font-size: 12px; + line-height: 1.5; + background: #fafafa; + height: 100%; + box-sizing: border-box; + text-align: left; +} + +hr { + border: 1px solid #007082; +} + +div.body { + background-color: #ffffff; + color: #000000; + padding: 60px; + flex: 1; +} + +div.body > .section { + text-align: left; +} + +div.footer { + width: 100%; + font-size: 14px; + background: #193d6a; + color: #ffffff; + text-align: center; + padding: 40px; + margin-top: auto; + z-index: 1000; +} + +div.footer a { + color: #ffffff; +} + +p.caption { + font-family: inherit; + font-size: inherit; +} + +div.relations { + display: none; +} + +div.sphinxsidebar { + max-height: 100%; + overflow-y: auto; + margin: 0; +} + +div.sphinxsidebar a { + color: #000000; + text-decoration: none; + border-bottom: 1.5px dotted #007082; +} + +div.sphinxsidebar a:hover { + border-bottom: 1px solid #999; +} + +div.sphinxsidebarwrapper { + padding: 20px 20px; +} + +div.sphinxsidebarwrapper p.logo { + padding: 20px 20px 20px 20px; + margin-bottom: 20px; + max-width: 200px; + content-align: left; + border-bottom: 1px solid #999; +} + +div.sphinxsidebarwrapper h1.logo { + margin-top: 0px; + text-align: left; + margin-bottom: 5px; +} + +div.sphinxsidebarwrapper h1.logo-name { + margin-top: 0px; +} + +div.sphinxsidebarwrapper p.blurb { + margin-bottom: 20px; + font-style: normal; + text-align: left; + font-size: 1rem; + white-space: nowrap; + overflow: hidden; + text-overflow: ellipsis; + max-width: 100%; +} + +div.sphinxsidebar h3, +div.sphinxsidebar h4 { + font-family: Arial, serif; + color: #193d6a; + font-size: 30px; + font-weight: normal; + margin: 40px 0 5px 0; + padding: 0; +} + +div.sphinxsidebar h4 { + font-size: 22px; +} + +div.sphinxsidebar h3 a { + color: #193d6a; +} + +div.sphinxsidebar p.logo a, +div.sphinxsidebar h3 a, +div.sphinxsidebar p.logo a:hover, +div.sphinxsidebar h3 a:hover { + border: none; +} + +div.sphinxsidebar p { + color: #000000; + font-size: 20px; + font-weight: bold; + margin: 10px 20px; +} + +div.sphinxsidebar ul { + margin: 10px 30px; + padding: 0; + color: #000; +} + +div.sphinxsidebar ul li.toctree-l1 > a { + font-size: 120%; +} + +div.sphinxsidebar ul li.toctree-l2 > a { + font-size: 110%; +} + +div.sphinxsidebar input { + border: 1px solid #CCC; + font-family: Arial; + font-size: 1em; +} + +div.sphinxsidebar #searchbox input[type="text"] { + width: 160px; +} + +div.sphinxsidebar .search > div { + display: table-cell; + font-family: Arial; +} + +div.sphinxsidebar hr { + border: none; + height: 1px; + color: #AAA; + background: #AAA; + + text-align: left; + margin-left: 0; + width: 50%; +} + +div.sphinxsidebar .badge { + border-bottom: none; +} + +div.sphinxsidebar .badge:hover { + border-bottom: none; +} + + +/* -- body styles ----------------------------------------------------------- */ + +a { + color: #007082; + text-decoration: underline; +} + +a:hover { + color: #cc1f46; + text-decoration: underline; +} + +div.body h1, +div.body h2, +div.body h3, +div.body h4, +div.body h5, +div.body h6 { + font-family: Arial; + font-weight: bold; + color: #193d6a; + margin: 40px 0px 10px 0px; + padding: 0; +} + +div.body h1 { margin-top: 0; padding-top: 0; font-size: 220%; } +div.body h2 { font-size: 180%; } +div.body h3 { font-size: 150%; } +div.body h4 { font-size: 130%; } +div.body h5 { font-size: 100%; } +div.body h6 { font-size: 100%; } + +a.headerlink { + color: #007082; + padding: 0 4px; + text-decoration: none; +} + +a.headerlink:hover { + color: 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case_studies/Forrestania/python_code/unconstrained_magnetics_inv_training - file: case_studies/Forrestania/python_code/joint_grav_mag +- file: plate-simulation/index + sections: + - file: plate-simulation/usage + title: Basic Usage + - file: plate-simulation/methodology + title: Methodology - file: THIRD_PARTY_SOFTWARE diff --git a/docs/conf.py b/docs/conf.py deleted file mode 100644 index 2f18464f..00000000 --- a/docs/conf.py +++ /dev/null @@ -1,68 +0,0 @@ -# Configuration file for the Sphinx documentation builder. -# -# For the full list of built-in configuration values, see the documentation: -# https://www.sphinx-doc.org/en/master/usage/configuration.html - -from importlib.metadata import version -from datetime import datetime -from packaging.version import Version - -# -- Project information ----------------------------------------------------- -# https://www.sphinx-doc.org/en/master/usage/configuration.html#project-information - -project = "simpeg-drivers" - -# The full version, including alpha/beta/rc tags. -release = version("simpeg-drivers") -# drop the post segment if any for release -pep_version = Version(release) -if pep_version.is_postrelease: - release = pep_version.base_version - -# The short X.Y.Z version. -version = Version(release).base_version - -project_copyright = "%Y, Mira Geoscience Ltd" - -# -- General configuration --------------------------------------------------- -# https://www.sphinx-doc.org/en/master/usage/configuration.html#general-configuration - -autodoc_mock_imports = [ - "geoapps_utils", - "geoh5py", - "numpy", -] -extensions = [ - "sphinx.ext.autodoc", - "sphinx.ext.autosummary", - "sphinx.ext.todo", -] - -templates_path = ["_templates"] -exclude_patterns = [] -todo_include_todos = True - -# -- Options for auto-doc ---------------------------------------------------- -# https://www.sphinx-doc.org/en/master/usage/extensions/autodoc.html#module-sphinx.ext.autodoc - -autodoc_typehints = "signature" - -# -- Options for HTML output ------------------------------------------------- -# https://www.sphinx-doc.org/en/master/usage/configuration.html#options-for-html-output - -html_theme = "alabaster" -html_theme_options = { - "description": f"version {release}", -} - -# Enable numref -numfig = True - - -def get_copyright_notice(): - return f"Copyright {datetime.now().strftime(project_copyright)}" - - -rst_epilog = f""" -.. |copyright_notice| replace:: {get_copyright_notice()}. -""" diff --git a/docs/environment.yml b/docs/environment.yml index d45ecbbd..e0f6b5c9 100644 --- a/docs/environment.yml +++ b/docs/environment.yml @@ -15,7 +15,7 @@ dependencies: - discretize - pip - ipykernel - - jupyter-book + - jupyter-book=1.0 - jupytext - notebook - zarr diff --git a/docs/fundamentals/background.ipynb b/docs/fundamentals/background.ipynb index 969dadc7..31783aee 100644 --- a/docs/fundamentals/background.ipynb +++ b/docs/fundamentals/background.ipynb @@ -78,7 +78,7 @@ }, { "cell_type": "code", - "execution_count": 1, + "execution_count": null, "id": "ae60914b", "metadata": { "lines_to_next_cell": 2 @@ -91,7 +91,7 @@ }, { "cell_type": "code", - "execution_count": 2, + "execution_count": null, "id": "f4503466", "metadata": {}, "outputs": [], @@ -110,21 +110,10 @@ }, { "cell_type": "code", - "execution_count": 3, + "execution_count": null, "id": "d94c5ea7", "metadata": {}, - "outputs": [ - { - "data": { - "text/plain": [ - "array([1.])" - ] - }, - "execution_count": 3, - "metadata": {}, - "output_type": "execute_result" - } - ], + "outputs": [], "source": [ "np.dot(F, [0.5, 0.25])" ] diff --git a/docs/images/plate-simulation/basic_usage/analyst_geophysics_menu.png b/docs/images/plate-simulation/basic_usage/analyst_geophysics_menu.png new file mode 100644 index 00000000..5f3c007f Binary files /dev/null and b/docs/images/plate-simulation/basic_usage/analyst_geophysics_menu.png differ diff --git a/docs/images/plate-simulation/index.png b/docs/images/plate-simulation/index.png new file mode 100644 index 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00000000..5629a42b Binary files /dev/null and b/docs/images/plate-simulation/methodology/sweep_option.png differ diff --git a/docs/images/plate-simulation/methodology/uijson.png b/docs/images/plate-simulation/methodology/uijson.png new file mode 100644 index 00000000..4a4b8c2b Binary files /dev/null and b/docs/images/plate-simulation/methodology/uijson.png differ diff --git a/docs/plate-simulation/index.rst b/docs/plate-simulation/index.rst new file mode 100644 index 00000000..eb8b2951 --- /dev/null +++ b/docs/plate-simulation/index.rst @@ -0,0 +1,21 @@ +.. _plate_simulation_index: + +Plate Simulation +================ + +.. figure:: /images/plate-simulation/index.png + :align: center + :width: 100% + +The plate-simulation application is a tool for simulating geophysical data over +a simple two-layer earth model with plate(s). It relies on the +`discretize `_ +and `SimPEG `_ projects to create a refined octree mesh and +simulate data over the parameterized model. The mesh, model and simulation +details are parameterized in a ui.json file that can be rendered in +`Geoscience ANALYST Pro `_. + +See: + +- :ref:`Basic Usage ` +- :ref:`Methodology ` diff --git a/docs/plate-simulation/methodology.rst b/docs/plate-simulation/methodology.rst new file mode 100644 index 00000000..87bbeeea --- /dev/null +++ b/docs/plate-simulation/methodology.rst @@ -0,0 +1,274 @@ +.. _plate_simulation_methodology: + +Plate Simulation: Methodology +============================= + +In order to simulate geophysical data from a physical property model, we +need three things: a computational mesh, a discretization of the model +within that mesh and a means to simulate the data. Plate simulation +relies on `discretize `_ for +octree mesh creation, and `SimPEG `_ for finite +volume based forward modeling. Plate simulation includes a module for +generating a simple two-layer model with embedded plate anomalies within +octree meshes. In this section, we will discuss all three of these +components, their interface exposed by the ui.json file, and the storage +of results. + +.. figure:: /images/plate-simulation/methodology/uijson.png + :align: center + :width: 80% + + *Merged images of both tabs of the ui.json rendered interface.* + +.. contents:: + +.. toctree:: + :maxdepth: 3 + +Octree Mesh +----------- + +In order to accurately simulate our earth model, we need a mesh +that is refined in key areas, while being coarse enough elsewhere to +efficiently simulate data. The plate simulation package includes +refinements at the earth-air interface, the transmitter and receiver +sites and on the surface of plates. + +.. figure:: /images/plate-simulation/methodology/mesh/refinement.png + :align: center + :width: 100% + + *Octree mesh refinement for earth-air interface, receiver sites, + and within the mesh.* + +The meshing can be controlled by options exposed in the ui.json. +Those options are significantly reduced compared with the octree creation from +`grid-app `_ +since we have tailored many of the parameters to suit the needs of plate simulation. + +.. figure:: /images/plate-simulation/methodology/mesh/mesh_options.png + :align: center + + *Octree mesh parameters exposed in the ui.json.* + +Geological Model +---------------- + +The plate simulation package includes a module for generating +plate(s) embedded in a two-layer Earth model within octree meshes. +There are many permutations of this simple geological scenario +leading to a complex interface. To simplify things, we have +broken the discussion into two sub-sections: background +(basement and overburden) and plates. + +Background +~~~~~~~~~~ + +All model values within plate-simulation are to be provided in +ohm-metres. The basement resistivity is actually closer to a +halfspace in the sense that it fills the model anywhere outside +of the overburden and plate. So the basement resistivity should +be chosen as an effective resistivity for the whole geological +section. This should be quite reasonable for most applications +where the differences in resistivity between layers is much smaller +than the difference between overburden and any anomalous bodies +(plates). + +.. figure:: /images/plate-simulation/methodology/model/basement_options.png + :align: center + + *Basement resistivity option.* + +The overburden is discretized by the resistivity and thickness +of the layer. The thickness is referenced to the earth-air +interface and extends into the earth by the amount specified +in the thickness parameter. + +.. figure:: /images/plate-simulation/methodology/model/overburden_options.png + :align: center + + *Overburden resistivity and thickness options.* + +.. figure:: /images/plate-simulation/methodology/model/overburden_and_basement.png + :align: center + :width: 100% + + *Model section highlighting the overburden and basement boundary.* + +Plates +~~~~~~ + +In this section we will discuss the various plate options available +through the ui.json and their impact on the resulting discretized +model. + +.. figure:: /images/plate-simulation/methodology/model/plate_options.png + :align: center + + *Plate options available in the ui.json.* + +The first set of options allows the user to specify the number of +plates and their spacing. + +.. figure:: /images/plate-simulation/methodology/model/n_plates_options.png + :align: center + + *Number of plates and spacing options.* + +For all choices of ``n>1``, the plates will be evenly spaced at the requested +spacing and will share the same resistivity, size and orientation. + +.. figure:: /images/plate-simulation/methodology/model/three_plates.png + :align: center + :width: 100% + + *Model created by choosing three plates spaced at 200m.* + +The plate resistivity is expected to be entered in ohm-metres. + +.. figure:: /images/plate-simulation/methodology/model/plate_resistivity_option.png + :align: center + + *Plate resistivity option.* + +The size of the plate is given as a 'thickness', 'strike length', and +'dip length'. + +.. figure:: /images/plate-simulation/methodology/model/plate_size_options.png + :align: center + + *Plate size options.* + +The image below shows a dipping plate with annotations showing the size +parameters for that particular plate. + +.. figure:: /images/plate-simulation/methodology/model/plate_size.png + :align: center + :width: 100% + + *A dipping plate striking northeast with annotations for its thickness, + strike length and dip length.* + +The orientation of the plate is provided in terms of a dip and dip direction. +The dip is defined as the angle between the horizontal projection of the plate +normal and the plate tangent sharing the same origin. The dip direction is +measured between the horizontal projection of the plate normal and the North +arrow. See the image below for a visual representation of these angles. + +.. figure:: /images/plate-simulation/methodology/model/plate_orientation.png + :align: center + :width: 100% + + *Plate orientation options. Plate orientation is given as a dip and dip direction. + The dip (b) is defined as the angle between the horizontal the projection of the + plate normal (n\') and the plate tangent sharing the same origin (t). The dip + direction (a) is the angle measured between the horizontal projection of the plate + normal (n\') and due north (N).* + +The location of the plate can be provided in both relative and absolute terms. +The position parameters are given as an easting, northing, and elevation. If the +relative locations checkbox is chosen, then the easting and northing will be +relative to the center of the survey and the elevation will be relative to one of +the available references. The elevation may either be referenced to the earth-air +interface or the overburden provided by the ``Depth reference`` dropdown. Either of +these choice can be relative to the minimum, maximum, or mean of the points making +up the reference surface as given by the ``Reference type`` dropdown. In all of these +cases the distance provided will act as a depth below the reference to the *top of +plate* in the *z negative down* convention. If the relative locations checkbox is not +chosen, then the easting, northing, and elevation is simply the location of the +center of the plate. + +.. figure:: /images/plate-simulation/methodology/model/plate_location_options.png + :align: center + + *Plate location options in relative mode. Notice the* ``Elevation`` *is given as + negative to ensure the top of the plate is below the selected min of the + overburden.* + +.. figure:: /images/plate-simulation/methodology/model/plate_location.png + :align: center + :width: 100% + + *Example of a relative elevation referenced 100m below the minimum of the + overburden layer.* + +Data Simulation +--------------- + +.. _simpeg_group_options: + +The simulation parameters control the forward modeling of the plate model +discretized within the octree mesh. Rather than exposing the parameters within +the plate simulation interface all over again, we simply allow the user to +select an existing forward modelling SimPEG group. It is expected that the +user will have already edited those options and provided at least a topography +and survey object as well as selected one or more components to simulate. The +user may also provide a name to the new SimPEG group that will be used to store +the results. + + +.. figure:: /images/plate-simulation/methodology/data/simpeg_group_options.png + :align: center + + *Selecting the initialized forward modelling SimPEG group and naming the + group that will store the plate simulation results.* + +The required SimPEG group can be created within Geoscience ANALYST through the +``Geophysics`` menu under ``SimPEG Python Interface`` entry. + +.. figure:: /images/plate-simulation/methodology/data/simpeg_group_creation.png + :align: center + :width: 100% + + *Creating a SimPEG group to be selected within the plate simulation interface.* + +Once created, the options can be edited by right-clicking the group and choosing +the 'Edit Options' entry. + +.. figure:: /images/plate-simulation/methodology/data/simpeg_group_edit_options.png + :align: center + + *Editing the SimPEG group options.* + +Since plate-simulation will create its own mesh and model, the mesh and +conductivity selections can be ignored. Selecting a value will not conflict +with the plate-simulation objects and will simply be ignored. In contrast, the +survey, topography and at least one component must be selected to run the simulation. + +.. figure:: /images/plate-simulation/methodology/data/simulation_options.png + :align: center + :width: 80% + + *Simulation options with annotations for required and not required components.* + +Results +------- + +The results of the simulation are stored in the SimPEG group named in the +:ref:`simpeg group option ` section. + +.. figure:: /images/plate-simulation/methodology/results.png + :align: center + + *Results group containing a survey object with all the simulated data channels + stored in property groups, and an octree mesh containing the model parameterized + in the interface.* + +To iterate on the design of experiment, simply copy the options, edit, and +run again. + +.. figure:: /images/plate-simulation/methodology/copy_options.png + :align: center + + *Copying the options to run a new simulation.* + +If the user wishes to sweep one or more of the input parameters to run a large number of +simulations, they can use the ``generate sweep file`` option to write a file used +by the `param-sweeps `_ package to do just +that. It is beyond the scope of this document to discuss the use of that package; +refer to its README for further details. + +.. figure:: /images/plate-simulation/methodology/sweep_option.png + :align: center + + *Generating a sweep file to run multiple simulations.* diff --git a/docs/plate-simulation/usage.rst b/docs/plate-simulation/usage.rst new file mode 100644 index 00000000..f940b6ca --- /dev/null +++ b/docs/plate-simulation/usage.rst @@ -0,0 +1,35 @@ +.. _plate_simulation_usage: + +Plate Simulation: Basic usage +============================= + +The main entry points to the various modules is the `plate_simulation.ui.json `_ +file. The ``ui.json`` has the dual purpose of (1) rendering a user-interface from +Geoscience ANALYST and (2) storing the input parameters chosen by the user for the +program to run. To learn more about the ui.json interface visit the +`UIJson documentation `_ page. + + +User-interface +-------------- + +The user-interface is accessible from Geoscience ANALYST Pro Geophysics menu. + +.. figure:: /images/plate-simulation/basic_usage/analyst_geophysics_menu.png + :align: center + :width: 800 + + +From command line +----------------- + +The application can also be run from the command line if all required fields in the ui.json are provided. +This is useful for more advanced users wanting to automate the mesh creation process or re-run an existing mesh with different parameters. + +To run the application from the command line, use the following command in a Conda Prompt: + +``conda activate plate-simulation`` + +``python -m plate-simulation.driver input_file.json`` + +where ``input_file.json`` is the path to the input file on disk. diff --git a/environments/env-python-3.10.yml b/environments/env-python-3.10.yml deleted file mode 100644 index 1dcc7283..00000000 --- a/environments/env-python-3.10.yml +++ /dev/null @@ -1,3 +0,0 @@ -dependencies: - - python=3.10.* - - pip diff --git a/environments/env-python-3.11.yml b/environments/env-python-3.11.yml deleted file mode 100644 index 6e378495..00000000 --- a/environments/env-python-3.11.yml +++ /dev/null @@ -1,3 +0,0 @@ -dependencies: - - python=3.11.* - - pip diff --git a/environments/env-python-3.12.yml b/environments/env-python-3.12.yml deleted file mode 100644 index edaff3d2..00000000 --- a/environments/env-python-3.12.yml +++ /dev/null @@ -1,3 +0,0 @@ -dependencies: - - python=3.12.* - - pip diff --git a/environments/py-3.10-linux-64-dev.conda.lock.yml b/environments/py-3.10-linux-64-dev.conda.lock.yml deleted file mode 100644 index 6a812053..00000000 --- a/environments/py-3.10-linux-64-dev.conda.lock.yml +++ /dev/null @@ -1,292 +0,0 @@ -# Generated by conda-lock. -# platform: linux-64 -# input_hash: 4b44185901b6b216814435620972c2fa2a8d727e93331e011fd42a3a947056ca - -channels: - - conda-forge - - nodefaults -dependencies: - - _openmp_mutex=4.5=6_kmp_llvm - - alabaster=0.7.16=pyhd8ed1ab_0 - 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- tblib=3.2.2=pyhcf101f3_0 - - terminado=0.18.1=pyh0d859eb_0 - - threadpoolctl=3.6.0=pyhecae5ae_0 - - tinycss2=1.5.0=pyhcf101f3_0 - - tk=8.6.13=noxft_ha0e22de_103 - - tomli=2.3.0=pyhcf101f3_0 - - tomlkit=0.13.3=pyha770c72_0 - - toolz=1.1.0=pyhd8ed1ab_1 - - tornado=6.5.2=py310h7c4b9e2_2 - - tqdm=4.67.1=pyhd8ed1ab_1 - - traitlets=5.14.3=pyhd8ed1ab_1 - - trimesh=4.1.8=pyhd8ed1ab_0 - - typing-extensions=4.15.0=h396c80c_0 - - typing-inspection=0.4.2=pyhd8ed1ab_0 - - typing_extensions=4.15.0=pyhcf101f3_0 - - typing_utils=0.1.0=pyhd8ed1ab_1 - - tzdata=2025b=h78e105d_0 - - unicodedata2=17.0.0=py310h7c4b9e2_1 - - uri-template=1.3.0=pyhd8ed1ab_1 - - urllib3=2.5.0=pyhd8ed1ab_0 - - wcwidth=0.2.14=pyhd8ed1ab_0 - - webcolors=25.10.0=pyhd8ed1ab_0 - - webencodings=0.5.1=pyhd8ed1ab_3 - - websocket-client=1.9.0=pyhd8ed1ab_0 - - wheel=0.45.1=pyhd8ed1ab_1 - - widgetsnbextension=3.6.10=pyhd8ed1ab_0 - - xorg-libxau=1.0.12=hb03c661_1 - - xorg-libxdmcp=1.1.5=hb03c661_1 - - xyzservices=2025.10.0=pyhd8ed1ab_0 - - yaml=0.2.5=h280c20c_3 - - zarr=2.14.2=pyhd8ed1ab_0 - - zeromq=4.3.5=h387f397_9 - - zict=3.0.0=pyhd8ed1ab_1 - - zipp=3.23.0=pyhd8ed1ab_0 - - zlib=1.3.1=hb9d3cd8_2 - - zstandard=0.25.0=py310h139afa4_1 - - zstd=1.5.7=hb8e6e7a_2 - - pip: - - geoapps-utils @ git+https://github.com/MiraGeoscience/geoapps-utils.git@15d04763f768cb6f56a3049c9c83a12c88f3060f - - geoh5py @ git+https://github.com/MiraGeoscience/geoh5py.git@6e27ace156c5f5898a77ae96566dea1d90de8cd8 - - grid-apps @ git+https://github.com/MiraGeoscience/grid-apps.git@d6a42611003c184354e1367de41a88783b928166 - - mira-simpeg @ git+https://github.com/MiraGeoscience/simpeg.git@374bd3eb0266841ae256ff8fdbf96cfa6d20f469 - -variables: - KMP_WARNINGS: 0 diff --git a/environments/py-3.10-linux-64.conda.lock.yml b/environments/py-3.10-linux-64.conda.lock.yml deleted file mode 100644 index 0b0394c8..00000000 --- a/environments/py-3.10-linux-64.conda.lock.yml +++ /dev/null @@ -1,167 +0,0 @@ -# Generated by conda-lock. -# platform: linux-64 -# input_hash: 4b44185901b6b216814435620972c2fa2a8d727e93331e011fd42a3a947056ca - -channels: - - conda-forge - - nodefaults -dependencies: - - _openmp_mutex=4.5=6_kmp_llvm - - annotated-types=0.7.0=pyhd8ed1ab_1 - - asciitree=0.3.3=py_2 - - bokeh=3.6.3=pyhd8ed1ab_0 - - brotli=1.2.0=h41a2e66_0 - - brotli-bin=1.2.0=hf2c8021_0 - - brotli-python=1.2.0=py310h8cfb67f_0 - - bzip2=1.0.8=hda65f42_8 - - c-ares=1.34.5=hb9d3cd8_0 - - ca-certificates=2025.11.12=hbd8a1cb_0 - - cached-property=1.5.2=hd8ed1ab_1 - - cached_property=1.5.2=pyha770c72_1 - - certifi=2025.11.12=pyhd8ed1ab_0 - - cffi=2.0.0=py310he7384ee_1 - - click=8.3.1=pyh707e725_0 - - cloudpickle=3.1.2=pyhd8ed1ab_0 - - colorama=0.4.6=pyhd8ed1ab_1 - - contourpy=1.3.2=py310h3788b33_0 - - cycler=0.12.1=pyhd8ed1ab_1 - - cytoolz=1.1.0=py310h7c4b9e2_1 - - dask-core=2025.3.0=pyhd8ed1ab_0 - - discretize=0.11.3=py310hc563356_1 - - distributed=2025.3.0=pyhd8ed1ab_0 - - fasteners=0.19=pyhd8ed1ab_1 - - fonttools=4.60.1=py310h3406613_0 - - freetype=2.14.1=ha770c72_0 - - fsspec=2025.10.0=pyhd8ed1ab_0 - - geoana=0.7.2=py310hc563356_1 - - h2=4.3.0=pyhcf101f3_0 - - h5py=3.15.1=nompi_py310h4aa865e_100 - - hdf5=1.14.6=nompi_h6e4c0c1_103 - - hpack=4.1.0=pyhd8ed1ab_0 - - hyperframe=6.1.0=pyhd8ed1ab_0 - - icu=75.1=he02047a_0 - - importlib-metadata=8.7.0=pyhe01879c_1 - - jinja2=3.1.6=pyhd8ed1ab_0 - - joblib=1.5.2=pyhd8ed1ab_0 - - keyutils=1.6.3=hb9d3cd8_0 - - kiwisolver=1.4.9=py310haaf941d_2 - - krb5=1.21.3=h659f571_0 - - lcms2=2.17=h717163a_0 - - ld_impl_linux-64=2.45=h1aa0949_0 - - lerc=4.0.0=h0aef613_1 - - libaec=1.1.4=h3f801dc_0 - - libblas=3.9.0=37_h5875eb1_mkl - - libbrotlicommon=1.2.0=h09219d5_0 - - libbrotlidec=1.2.0=hd53d788_0 - - libbrotlienc=1.2.0=h02bd7ab_0 - - libcblas=3.9.0=37_hfef963f_mkl - - libcurl=8.17.0=h4e3cde8_0 - - libdeflate=1.25=h17f619e_0 - - libdlf=0.3.0=pyhd8ed1ab_1 - - libedit=3.1.20250104=pl5321h7949ede_0 - - libev=4.33=hd590300_2 - - libexpat=2.7.3=hecca717_0 - - libffi=3.5.2=h9ec8514_0 - - libfreetype=2.14.1=ha770c72_0 - - libfreetype6=2.14.1=h73754d4_0 - - libgcc=15.2.0=h767d61c_7 - - libgcc-ng=15.2.0=h69a702a_7 - - libgfortran=15.2.0=h69a702a_7 - - libgfortran5=15.2.0=hcd61629_7 - - libhwloc=2.12.1=default_h7f8ec31_1002 - - libiconv=1.18=h3b78370_2 - - libjpeg-turbo=3.1.2=hb03c661_0 - - liblapack=3.9.0=37_h5e43f62_mkl - - liblzma=5.8.1=hb9d3cd8_2 - - libnghttp2=1.67.0=had1ee68_0 - - libnsl=2.0.1=hb9d3cd8_1 - - libpng=1.6.50=h421ea60_1 - - libscotch=7.0.6=hea33c07_1 - - libspatialindex=2.0.0=he02047a_0 - - libsqlite=3.51.0=hee844dc_0 - - libssh2=1.11.1=hcf80075_0 - - libstdcxx=15.2.0=h8f9b012_7 - - libstdcxx-ng=15.2.0=h4852527_7 - - libtiff=4.7.1=h9d88235_1 - - libuuid=2.41.2=he9a06e4_0 - - libwebp-base=1.6.0=hd42ef1d_0 - - libxcb=1.17.0=h8a09558_0 - - libxcrypt=4.4.36=hd590300_1 - - libxml2=2.15.1=h26afc86_0 - - libxml2-16=2.15.1=ha9997c6_0 - - libzlib=1.3.1=hb9d3cd8_2 - - llvm-openmp=21.1.6=h4922eb0_0 - - locket=1.0.0=pyhd8ed1ab_0 - - markupsafe=3.0.3=py310h3406613_0 - - matplotlib-base=3.8.4=py310hef631a5_2 - - metis=5.1.0=hd0bcaf9_1007 - - mkl=2024.2.2=ha770c72_17 - - msgpack-python=1.1.2=py310h03d9f68_1 - - mumps-include=5.7.3=h82cca05_10 - - mumps-seq=5.7.3=h06cbf8f_10 - - munkres=1.1.4=pyhd8ed1ab_1 - - ncurses=6.5=h2d0b736_3 - - numcodecs=0.13.1=py310h5eaa309_0 - - numpy=1.26.4=py310hb13e2d6_0 - - openjpeg=2.5.4=h55fea9a_0 - - openssl=3.6.0=h26f9b46_0 - - packaging=25.0=pyh29332c3_1 - - pandas=2.3.3=py310h0158d43_1 - - partd=1.4.2=pyhd8ed1ab_0 - - pillow=10.3.0=py310hebfe307_1 - - pip=25.3=pyh8b19718_0 - - psutil=7.1.3=py310h139afa4_0 - - pthread-stubs=0.4=hb9d3cd8_1002 - - pycparser=2.22=pyh29332c3_1 - - pydantic=2.12.4=pyh3cfb1c2_0 - - pydantic-core=2.41.5=py310hd8f68c5_1 - - pydiso=0.1.2=py310h4b187eb_1 - - pymatsolver=0.3.1=pyh48887ae_201 - - pyparsing=3.2.5=pyhcf101f3_0 - - pysocks=1.7.1=pyha55dd90_7 - - python=3.10.19=h3c07f61_2_cpython - - python-dateutil=2.9.0.post0=pyhe01879c_2 - - python-mumps=0.0.3=py310h6410a28_0 - - python-tzdata=2025.2=pyhd8ed1ab_0 - - python_abi=3.10=8_cp310 - - pytz=2025.2=pyhd8ed1ab_0 - - pyyaml=6.0.3=py310h3406613_0 - - readline=8.2=h8c095d6_2 - - rtree=1.2.0=py310haf1e407_1 - - scikit-learn=1.6.1=py310h27f47ee_0 - - scipy=1.14.1=py310hfcf56fc_2 - - setuptools=80.9.0=pyhff2d567_0 - - six=1.17.0=pyhe01879c_1 - - sortedcontainers=2.4.0=pyhd8ed1ab_1 - - tbb=2021.13.0=h8d10470_4 - - tblib=3.2.2=pyhcf101f3_0 - - threadpoolctl=3.6.0=pyhecae5ae_0 - - tk=8.6.13=noxft_ha0e22de_103 - - toolz=1.1.0=pyhd8ed1ab_1 - - tornado=6.5.2=py310h7c4b9e2_2 - - tqdm=4.67.1=pyhd8ed1ab_1 - - trimesh=4.1.8=pyhd8ed1ab_0 - - typing-extensions=4.15.0=h396c80c_0 - - typing-inspection=0.4.2=pyhd8ed1ab_0 - - typing_extensions=4.15.0=pyhcf101f3_0 - - tzdata=2025b=h78e105d_0 - - unicodedata2=17.0.0=py310h7c4b9e2_1 - - urllib3=2.5.0=pyhd8ed1ab_0 - - wheel=0.45.1=pyhd8ed1ab_1 - - xorg-libxau=1.0.12=hb03c661_1 - - xorg-libxdmcp=1.1.5=hb03c661_1 - - xyzservices=2025.10.0=pyhd8ed1ab_0 - - yaml=0.2.5=h280c20c_3 - - zarr=2.14.2=pyhd8ed1ab_0 - - zict=3.0.0=pyhd8ed1ab_1 - - zipp=3.23.0=pyhd8ed1ab_0 - - zstandard=0.25.0=py310h139afa4_1 - - zstd=1.5.7=hb8e6e7a_2 - - pip: - - geoapps-utils @ git+https://github.com/MiraGeoscience/geoapps-utils.git@15d04763f768cb6f56a3049c9c83a12c88f3060f - - geoh5py @ git+https://github.com/MiraGeoscience/geoh5py.git@6e27ace156c5f5898a77ae96566dea1d90de8cd8 - - grid-apps @ git+https://github.com/MiraGeoscience/grid-apps.git@d6a42611003c184354e1367de41a88783b928166 - - mira-simpeg @ git+https://github.com/MiraGeoscience/simpeg.git@374bd3eb0266841ae256ff8fdbf96cfa6d20f469 - -variables: - KMP_WARNINGS: 0 diff --git a/environments/py-3.10-win-64-dev.conda.lock.yml b/environments/py-3.10-win-64-dev.conda.lock.yml deleted file mode 100644 index 99d86e4a..00000000 --- a/environments/py-3.10-win-64-dev.conda.lock.yml +++ /dev/null @@ -1,278 +0,0 @@ -# Generated by conda-lock. -# platform: win-64 -# input_hash: 4b50ba3c2f65610d4554600e47eaa435e2e4e4159dc928f313a69c754f1172f8 - -channels: - - conda-forge - - nodefaults -dependencies: - - _openmp_mutex=4.5=2_gnu - - alabaster=0.7.16=pyhd8ed1ab_0 - - annotated-types=0.7.0=pyhd8ed1ab_1 - - anyio=4.11.0=pyhcf101f3_0 - - argon2-cffi=25.1.0=pyhd8ed1ab_0 - - argon2-cffi-bindings=25.1.0=py310h29418f3_2 - - arrow=1.4.0=pyhcf101f3_0 - - asciitree=0.3.3=py_2 - - astroid=4.0.2=py310h5588dad_0 - - asttokens=3.0.1=pyhd8ed1ab_0 - - async-lru=2.0.5=pyh29332c3_0 - - attrs=25.4.0=pyh71513ae_0 - - babel=2.17.0=pyhd8ed1ab_0 - - beautifulsoup4=4.14.2=pyha770c72_0 - - bleach=6.3.0=pyhcf101f3_0 - - bleach-with-css=6.3.0=h5f6438b_0 - - bokeh=3.6.3=pyhd8ed1ab_0 - - brotli=1.2.0=h17ff524_0 - - brotli-bin=1.2.0=h6910e44_0 - - brotli-python=1.2.0=py310h8abc2a3_0 - - bzip2=1.0.8=h0ad9c76_8 - - ca-certificates=2025.11.12=h4c7d964_0 - - cached-property=1.5.2=hd8ed1ab_1 - - cached_property=1.5.2=pyha770c72_1 - - certifi=2025.11.12=pyhd8ed1ab_0 - - cffi=2.0.0=py310h29418f3_1 - - charset-normalizer=3.4.4=pyhd8ed1ab_0 - - click=8.3.1=pyh7428d3b_0 - - cloudpickle=3.1.2=pyhd8ed1ab_0 - - colorama=0.4.6=pyhd8ed1ab_1 - - comm=0.2.3=pyhe01879c_0 - - contourpy=1.3.2=py310hc19bc0b_0 - - coverage=7.12.0=py310hdb0e946_0 - - cycler=0.12.1=pyhd8ed1ab_1 - - cytoolz=1.1.0=py310h29418f3_1 - - dask-core=2025.3.0=pyhd8ed1ab_0 - - debugpy=1.8.17=py310h699e580_0 - - decorator=5.2.1=pyhd8ed1ab_0 - - defusedxml=0.7.1=pyhd8ed1ab_0 - - dill=0.4.0=pyhd8ed1ab_0 - - discretize=0.11.3=py310hfb7dd09_1 - - distributed=2025.3.0=pyhd8ed1ab_0 - - docutils=0.19=py310h5588dad_1 - - exceptiongroup=1.3.0=pyhd8ed1ab_0 - - executing=2.2.1=pyhd8ed1ab_0 - - fasteners=0.19=pyhd8ed1ab_1 - - fonttools=4.60.1=py310hdb0e946_0 - - fqdn=1.5.1=pyhd8ed1ab_1 - - freetype=2.14.1=h57928b3_0 - - fsspec=2025.10.0=pyhd8ed1ab_0 - - geoana=0.7.2=py310hfb7dd09_1 - - h11=0.16.0=pyhd8ed1ab_0 - - h2=4.3.0=pyhcf101f3_0 - - h5py=3.15.1=nompi_py310hb7e4da9_100 - - hdf5=1.14.6=nompi_he30205f_103 - - hpack=4.1.0=pyhd8ed1ab_0 - - httpcore=1.0.9=pyh29332c3_0 - - httpx=0.28.1=pyhd8ed1ab_0 - - hyperframe=6.1.0=pyhd8ed1ab_0 - - idna=3.11=pyhd8ed1ab_0 - - imagesize=1.4.1=pyhd8ed1ab_0 - - importlib-metadata=8.7.0=pyhe01879c_1 - - importlib_resources=6.5.2=pyhd8ed1ab_0 - - iniconfig=2.3.0=pyhd8ed1ab_0 - - ipykernel=7.1.0=pyh6dadd2b_0 - - ipython=8.37.0=pyha7b4d00_0 - - ipython_genutils=0.2.0=pyhd8ed1ab_2 - - ipywidgets=7.8.5=pyhd8ed1ab_0 - - isoduration=20.11.0=pyhd8ed1ab_1 - - isort=7.0.0=pyhd8ed1ab_0 - - jedi=0.19.2=pyhd8ed1ab_1 - - jinja2=3.1.6=pyhd8ed1ab_0 - - joblib=1.5.2=pyhd8ed1ab_0 - - json5=0.12.1=pyhd8ed1ab_0 - - jsonpointer=3.0.0=py310h5588dad_2 - - jsonschema=4.25.1=pyhe01879c_0 - - jsonschema-specifications=2025.9.1=pyhcf101f3_0 - - jsonschema-with-format-nongpl=4.25.1=he01879c_0 - - jupyter-book=2.0.2=pyhcf101f3_0 - - jupyter-lsp=2.3.0=pyhcf101f3_0 - - jupyter_client=8.6.3=pyhd8ed1ab_1 - - jupyter_core=5.9.1=pyh6dadd2b_0 - - jupyter_events=0.12.0=pyh29332c3_0 - - jupyter_server=2.17.0=pyhcf101f3_0 - - jupyter_server_terminals=0.5.3=pyhd8ed1ab_1 - - jupyterlab=4.5.0=pyhd8ed1ab_0 - - jupyterlab_pygments=0.3.0=pyhd8ed1ab_2 - - jupyterlab_server=2.28.0=pyhcf101f3_0 - - jupyterlab_widgets=1.1.11=pyhd8ed1ab_0 - - jupytext=1.18.1=pyh80e38bb_0 - - kiwisolver=1.4.9=py310h1e1005b_2 - - krb5=1.21.3=hdf4eb48_0 - - lark=1.3.1=pyhd8ed1ab_0 - - lcms2=2.17=hbcf6048_0 - - lerc=4.0.0=h6470a55_1 - - libaec=1.1.4=h20038f6_0 - - libblas=3.9.0=35_h5709861_mkl - - libbrotlicommon=1.2.0=hc82b238_0 - - libbrotlidec=1.2.0=h431afc6_0 - - libbrotlienc=1.2.0=ha521d6b_0 - - libcblas=3.9.0=35_h2a3cdd5_mkl - - libcurl=8.17.0=h43ecb02_0 - - libdeflate=1.25=h51727cc_0 - - libdlf=0.3.0=pyhd8ed1ab_1 - - libexpat=2.7.3=hac47afa_0 - - libffi=3.5.2=h52bdfb6_0 - - libfreetype=2.14.1=h57928b3_0 - - libfreetype6=2.14.1=hdbac1cb_0 - - libgcc=15.2.0=h1383e82_7 - - libgomp=15.2.0=h1383e82_7 - - libhwloc=2.12.1=default_h64bd3f2_1002 - - libiconv=1.18=hc1393d2_2 - - libjpeg-turbo=3.1.2=hfd05255_0 - - liblapack=3.9.0=35_hf9ab0e9_mkl - - liblzma=5.8.1=h2466b09_2 - - libpng=1.6.50=h7351971_1 - - libsodium=1.0.20=hc70643c_0 - - libspatialindex=2.0.0=h5a68840_0 - - libsqlite=3.51.0=hf5d6505_0 - - libssh2=1.11.1=h9aa295b_0 - - libtiff=4.7.1=h8f73337_1 - - libwebp-base=1.6.0=h4d5522a_0 - - libwinpthread=12.0.0.r4.gg4f2fc60ca=h57928b3_10 - - libxcb=1.17.0=h0e4246c_0 - - libxml2=2.15.1=h5d26750_0 - - libxml2-16=2.15.1=h692994f_0 - - libzlib=1.3.1=h2466b09_2 - - llvm-openmp=21.1.6=h4fa8253_0 - - locket=1.0.0=pyhd8ed1ab_0 - - markdown-it-py=4.0.0=pyhd8ed1ab_0 - - markupsafe=3.0.3=py310hdb0e946_0 - - matplotlib-base=3.8.4=py310hadb10a8_2 - - matplotlib-inline=0.2.1=pyhd8ed1ab_0 - - mccabe=0.7.0=pyhd8ed1ab_1 - - mdit-py-plugins=0.5.0=pyhd8ed1ab_0 - - mdurl=0.1.2=pyhd8ed1ab_1 - - mistune=3.1.4=pyhcf101f3_0 - - mkl=2024.2.2=h57928b3_16 - - msgpack-python=1.1.2=py310he9f1925_1 - - mumps-seq=5.7.3=hbaa6519_10 - - munkres=1.1.4=pyhd8ed1ab_1 - - nbclient=0.10.2=pyhd8ed1ab_0 - - nbconvert=7.16.6=hc388f54_1 - - nbconvert-core=7.16.6=pyhcf101f3_1 - - nbconvert-pandoc=7.16.6=h7d6f222_1 - - nbformat=5.10.4=pyhd8ed1ab_1 - - nest-asyncio=1.6.0=pyhd8ed1ab_1 - - nodejs=24.9.0=he453025_0 - - notebook=7.5.0=pyhcf101f3_0 - - notebook-shim=0.2.4=pyhd8ed1ab_1 - - numcodecs=0.13.1=py310hb4db72f_0 - - numpy=1.26.4=py310hf667824_0 - - openjpeg=2.5.4=h24db6dd_0 - - openssl=3.6.0=h725018a_0 - - overrides=7.7.0=pyhd8ed1ab_1 - - packaging=25.0=pyh29332c3_1 - - pandas=2.3.3=py310hed136d8_1 - - pandoc=3.8.2.1=h57928b3_0 - - pandocfilters=1.5.0=pyhd8ed1ab_0 - - parso=0.8.5=pyhcf101f3_0 - - partd=1.4.2=pyhd8ed1ab_0 - - pickleshare=0.7.5=pyhd8ed1ab_1004 - - pillow=10.3.0=py310h3e38d90_1 - - pip=25.3=pyh8b19718_0 - - platformdirs=4.5.0=pyhcf101f3_0 - - pluggy=1.6.0=pyhd8ed1ab_0 - - prometheus_client=0.23.1=pyhd8ed1ab_0 - - prompt-toolkit=3.0.52=pyha770c72_0 - - psutil=7.1.3=py310h1637853_0 - - pthread-stubs=0.4=h0e40799_1002 - - pure_eval=0.2.3=pyhd8ed1ab_1 - - pycparser=2.22=pyh29332c3_1 - - pydantic=2.12.4=pyh3cfb1c2_0 - - pydantic-core=2.41.5=py310h034784e_1 - - pydiso=0.1.2=py310h3dbbb0c_1 - - pygments=2.19.2=pyhd8ed1ab_0 - - pylint=4.0.3=pyhcf101f3_0 - - pymatsolver=0.3.1=pyh48887ae_201 - - pyparsing=3.2.5=pyhcf101f3_0 - - pysocks=1.7.1=pyh09c184e_7 - - pytest=9.0.1=pyhcf101f3_0 - - pytest-cov=7.0.0=pyhcf101f3_1 - - python=3.10.19=hc20f281_2_cpython - - python-dateutil=2.9.0.post0=pyhe01879c_2 - - python-fastjsonschema=2.21.2=pyhe01879c_0 - - python-json-logger=2.0.7=pyhd8ed1ab_0 - - python-mumps=0.0.3=py310hb64895d_0 - - python-tzdata=2025.2=pyhd8ed1ab_0 - - python_abi=3.10=8_cp310 - - pytz=2025.2=pyhd8ed1ab_0 - - pywin32=311=py310h282bd7d_1 - - pywinpty=2.0.15=py310h9e98ed7_1 - - pyyaml=6.0.3=py310hdb0e946_0 - - pyzmq=27.1.0=py310h535538e_0 - - readthedocs-sphinx-ext=2.2.5=pyhd8ed1ab_1 - - referencing=0.37.0=pyhcf101f3_0 - - requests=2.32.5=pyhd8ed1ab_0 - - rfc3339-validator=0.1.4=pyhd8ed1ab_1 - - rfc3986-validator=0.1.1=pyh9f0ad1d_0 - - rfc3987-syntax=1.1.0=pyhe01879c_1 - - rpds-py=0.29.0=py310h034784e_0 - - rtree=1.2.0=py310h08d5ad2_1 - - scikit-learn=1.6.1=py310hf2a6c47_0 - - scipy=1.14.1=py310hbd0dde3_2 - - send2trash=1.8.3=pyh5737063_1 - - setuptools=80.9.0=pyhff2d567_0 - - six=1.17.0=pyhe01879c_1 - - sniffio=1.3.1=pyhd8ed1ab_2 - - snowballstemmer=3.0.1=pyhd8ed1ab_0 - - sortedcontainers=2.4.0=pyhd8ed1ab_1 - - soupsieve=2.8=pyhd8ed1ab_0 - - sphinx=5.3.0=pyhd8ed1ab_0 - - sphinxcontrib-applehelp=2.0.0=pyhd8ed1ab_1 - - sphinxcontrib-devhelp=2.0.0=pyhd8ed1ab_1 - - sphinxcontrib-htmlhelp=2.1.0=pyhd8ed1ab_1 - - sphinxcontrib-jsmath=1.0.1=pyhd8ed1ab_1 - - sphinxcontrib-qthelp=2.0.0=pyhd8ed1ab_1 - - sphinxcontrib-serializinghtml=1.1.10=pyhd8ed1ab_1 - - stack_data=0.6.3=pyhd8ed1ab_1 - - tbb=2021.13.0=hd094cb3_4 - - tblib=3.2.2=pyhcf101f3_0 - - terminado=0.18.1=pyh5737063_0 - - threadpoolctl=3.6.0=pyhecae5ae_0 - - tinycss2=1.5.0=pyhcf101f3_0 - - tk=8.6.13=h2c6b04d_3 - - tomli=2.3.0=pyhcf101f3_0 - - tomlkit=0.13.3=pyha770c72_0 - - toolz=1.1.0=pyhd8ed1ab_1 - - tornado=6.5.2=py310h29418f3_2 - - tqdm=4.67.1=pyhd8ed1ab_1 - - traitlets=5.14.3=pyhd8ed1ab_1 - - trimesh=4.1.8=pyhd8ed1ab_0 - - typing-extensions=4.15.0=h396c80c_0 - - typing-inspection=0.4.2=pyhd8ed1ab_0 - - typing_extensions=4.15.0=pyhcf101f3_0 - - typing_utils=0.1.0=pyhd8ed1ab_1 - - tzdata=2025b=h78e105d_0 - - ucrt=10.0.26100.0=h57928b3_0 - - unicodedata2=17.0.0=py310h29418f3_1 - - uri-template=1.3.0=pyhd8ed1ab_1 - - urllib3=2.5.0=pyhd8ed1ab_0 - - vc=14.3=h2b53caa_32 - - vc14_runtime=14.44.35208=h818238b_32 - - vcomp14=14.44.35208=h818238b_32 - - wcwidth=0.2.14=pyhd8ed1ab_0 - - webcolors=25.10.0=pyhd8ed1ab_0 - - webencodings=0.5.1=pyhd8ed1ab_3 - - websocket-client=1.9.0=pyhd8ed1ab_0 - - wheel=0.45.1=pyhd8ed1ab_1 - - widgetsnbextension=3.6.10=pyhd8ed1ab_0 - - win_inet_pton=1.1.0=pyh7428d3b_8 - - winpty=0.4.3=4 - - xorg-libxau=1.0.12=hba3369d_1 - - xorg-libxdmcp=1.1.5=hba3369d_1 - - xyzservices=2025.10.0=pyhd8ed1ab_0 - - yaml=0.2.5=h6a83c73_3 - - zarr=2.14.2=pyhd8ed1ab_0 - - zeromq=4.3.5=h5bddc39_9 - - zict=3.0.0=pyhd8ed1ab_1 - - zipp=3.23.0=pyhd8ed1ab_0 - - zstandard=0.25.0=py310h1637853_1 - - zstd=1.5.7=hbeecb71_2 - - pip: - - geoapps-utils @ git+https://github.com/MiraGeoscience/geoapps-utils.git@15d04763f768cb6f56a3049c9c83a12c88f3060f - - geoh5py @ git+https://github.com/MiraGeoscience/geoh5py.git@6e27ace156c5f5898a77ae96566dea1d90de8cd8 - - grid-apps @ git+https://github.com/MiraGeoscience/grid-apps.git@d6a42611003c184354e1367de41a88783b928166 - - mira-simpeg @ git+https://github.com/MiraGeoscience/simpeg.git@374bd3eb0266841ae256ff8fdbf96cfa6d20f469 - -variables: - KMP_WARNINGS: 0 diff --git a/environments/py-3.10-win-64.conda.lock.yml b/environments/py-3.10-win-64.conda.lock.yml deleted file mode 100644 index c6d4373f..00000000 --- a/environments/py-3.10-win-64.conda.lock.yml +++ /dev/null @@ -1,154 +0,0 @@ -# Generated by conda-lock. -# platform: win-64 -# input_hash: 4b50ba3c2f65610d4554600e47eaa435e2e4e4159dc928f313a69c754f1172f8 - -channels: - - conda-forge - - nodefaults -dependencies: - - _openmp_mutex=4.5=2_gnu - - annotated-types=0.7.0=pyhd8ed1ab_1 - - asciitree=0.3.3=py_2 - - bokeh=3.6.3=pyhd8ed1ab_0 - - brotli=1.2.0=h17ff524_0 - - brotli-bin=1.2.0=h6910e44_0 - - brotli-python=1.2.0=py310h8abc2a3_0 - - bzip2=1.0.8=h0ad9c76_8 - - ca-certificates=2025.11.12=h4c7d964_0 - - cached-property=1.5.2=hd8ed1ab_1 - - cached_property=1.5.2=pyha770c72_1 - - certifi=2025.11.12=pyhd8ed1ab_0 - - cffi=2.0.0=py310h29418f3_1 - - click=8.3.1=pyh7428d3b_0 - - cloudpickle=3.1.2=pyhd8ed1ab_0 - - colorama=0.4.6=pyhd8ed1ab_1 - - contourpy=1.3.2=py310hc19bc0b_0 - - cycler=0.12.1=pyhd8ed1ab_1 - - cytoolz=1.1.0=py310h29418f3_1 - - dask-core=2025.3.0=pyhd8ed1ab_0 - - discretize=0.11.3=py310hfb7dd09_1 - - distributed=2025.3.0=pyhd8ed1ab_0 - - fasteners=0.19=pyhd8ed1ab_1 - - fonttools=4.60.1=py310hdb0e946_0 - - freetype=2.14.1=h57928b3_0 - - fsspec=2025.10.0=pyhd8ed1ab_0 - - geoana=0.7.2=py310hfb7dd09_1 - - h2=4.3.0=pyhcf101f3_0 - - h5py=3.15.1=nompi_py310hb7e4da9_100 - - hdf5=1.14.6=nompi_he30205f_103 - - hpack=4.1.0=pyhd8ed1ab_0 - - hyperframe=6.1.0=pyhd8ed1ab_0 - - importlib-metadata=8.7.0=pyhe01879c_1 - - jinja2=3.1.6=pyhd8ed1ab_0 - - joblib=1.5.2=pyhd8ed1ab_0 - - kiwisolver=1.4.9=py310h1e1005b_2 - - krb5=1.21.3=hdf4eb48_0 - - lcms2=2.17=hbcf6048_0 - - lerc=4.0.0=h6470a55_1 - - libaec=1.1.4=h20038f6_0 - - libblas=3.9.0=35_h5709861_mkl - - libbrotlicommon=1.2.0=hc82b238_0 - - libbrotlidec=1.2.0=h431afc6_0 - - libbrotlienc=1.2.0=ha521d6b_0 - - libcblas=3.9.0=35_h2a3cdd5_mkl - - libcurl=8.17.0=h43ecb02_0 - - libdeflate=1.25=h51727cc_0 - - libdlf=0.3.0=pyhd8ed1ab_1 - - libexpat=2.7.3=hac47afa_0 - - libffi=3.5.2=h52bdfb6_0 - - libfreetype=2.14.1=h57928b3_0 - - libfreetype6=2.14.1=hdbac1cb_0 - - libgcc=15.2.0=h1383e82_7 - - libgomp=15.2.0=h1383e82_7 - - libhwloc=2.12.1=default_h64bd3f2_1002 - - libiconv=1.18=hc1393d2_2 - - libjpeg-turbo=3.1.2=hfd05255_0 - - liblapack=3.9.0=35_hf9ab0e9_mkl - - liblzma=5.8.1=h2466b09_2 - - libpng=1.6.50=h7351971_1 - - libspatialindex=2.0.0=h5a68840_0 - - libsqlite=3.51.0=hf5d6505_0 - - libssh2=1.11.1=h9aa295b_0 - - libtiff=4.7.1=h8f73337_1 - - libwebp-base=1.6.0=h4d5522a_0 - - libwinpthread=12.0.0.r4.gg4f2fc60ca=h57928b3_10 - - libxcb=1.17.0=h0e4246c_0 - - libxml2=2.15.1=h5d26750_0 - - libxml2-16=2.15.1=h692994f_0 - - libzlib=1.3.1=h2466b09_2 - - llvm-openmp=21.1.6=h4fa8253_0 - - locket=1.0.0=pyhd8ed1ab_0 - - markupsafe=3.0.3=py310hdb0e946_0 - - matplotlib-base=3.8.4=py310hadb10a8_2 - - mkl=2024.2.2=h57928b3_16 - - msgpack-python=1.1.2=py310he9f1925_1 - - mumps-seq=5.7.3=hbaa6519_10 - - munkres=1.1.4=pyhd8ed1ab_1 - - numcodecs=0.13.1=py310hb4db72f_0 - - numpy=1.26.4=py310hf667824_0 - - openjpeg=2.5.4=h24db6dd_0 - - openssl=3.6.0=h725018a_0 - - packaging=25.0=pyh29332c3_1 - - pandas=2.3.3=py310hed136d8_1 - - partd=1.4.2=pyhd8ed1ab_0 - - pillow=10.3.0=py310h3e38d90_1 - - pip=25.3=pyh8b19718_0 - - psutil=7.1.3=py310h1637853_0 - - pthread-stubs=0.4=h0e40799_1002 - - pycparser=2.22=pyh29332c3_1 - - pydantic=2.12.4=pyh3cfb1c2_0 - - pydantic-core=2.41.5=py310h034784e_1 - - pydiso=0.1.2=py310h3dbbb0c_1 - - pymatsolver=0.3.1=pyh48887ae_201 - - pyparsing=3.2.5=pyhcf101f3_0 - - pysocks=1.7.1=pyh09c184e_7 - - python=3.10.19=hc20f281_2_cpython - - python-dateutil=2.9.0.post0=pyhe01879c_2 - - python-mumps=0.0.3=py310hb64895d_0 - - python-tzdata=2025.2=pyhd8ed1ab_0 - - python_abi=3.10=8_cp310 - - pytz=2025.2=pyhd8ed1ab_0 - - pyyaml=6.0.3=py310hdb0e946_0 - - rtree=1.2.0=py310h08d5ad2_1 - - scikit-learn=1.6.1=py310hf2a6c47_0 - - scipy=1.14.1=py310hbd0dde3_2 - - setuptools=80.9.0=pyhff2d567_0 - - six=1.17.0=pyhe01879c_1 - - sortedcontainers=2.4.0=pyhd8ed1ab_1 - - tbb=2021.13.0=hd094cb3_4 - - tblib=3.2.2=pyhcf101f3_0 - - threadpoolctl=3.6.0=pyhecae5ae_0 - - tk=8.6.13=h2c6b04d_3 - - toolz=1.1.0=pyhd8ed1ab_1 - - tornado=6.5.2=py310h29418f3_2 - - tqdm=4.67.1=pyhd8ed1ab_1 - - trimesh=4.1.8=pyhd8ed1ab_0 - - typing-extensions=4.15.0=h396c80c_0 - - typing-inspection=0.4.2=pyhd8ed1ab_0 - - typing_extensions=4.15.0=pyhcf101f3_0 - - tzdata=2025b=h78e105d_0 - - ucrt=10.0.26100.0=h57928b3_0 - - unicodedata2=17.0.0=py310h29418f3_1 - - urllib3=2.5.0=pyhd8ed1ab_0 - - vc=14.3=h2b53caa_32 - - vc14_runtime=14.44.35208=h818238b_32 - - vcomp14=14.44.35208=h818238b_32 - - wheel=0.45.1=pyhd8ed1ab_1 - - win_inet_pton=1.1.0=pyh7428d3b_8 - - xorg-libxau=1.0.12=hba3369d_1 - - xorg-libxdmcp=1.1.5=hba3369d_1 - - xyzservices=2025.10.0=pyhd8ed1ab_0 - - yaml=0.2.5=h6a83c73_3 - - zarr=2.14.2=pyhd8ed1ab_0 - - zict=3.0.0=pyhd8ed1ab_1 - - zipp=3.23.0=pyhd8ed1ab_0 - - zstandard=0.25.0=py310h1637853_1 - - zstd=1.5.7=hbeecb71_2 - - pip: - - geoapps-utils @ git+https://github.com/MiraGeoscience/geoapps-utils.git@15d04763f768cb6f56a3049c9c83a12c88f3060f - - geoh5py @ git+https://github.com/MiraGeoscience/geoh5py.git@6e27ace156c5f5898a77ae96566dea1d90de8cd8 - - grid-apps @ git+https://github.com/MiraGeoscience/grid-apps.git@d6a42611003c184354e1367de41a88783b928166 - - mira-simpeg @ git+https://github.com/MiraGeoscience/simpeg.git@374bd3eb0266841ae256ff8fdbf96cfa6d20f469 - -variables: - KMP_WARNINGS: 0 diff --git a/environments/py-3.11-linux-64-dev.conda.lock.yml b/environments/py-3.11-linux-64-dev.conda.lock.yml deleted file mode 100644 index 74d447d8..00000000 --- a/environments/py-3.11-linux-64-dev.conda.lock.yml +++ /dev/null @@ -1,294 +0,0 @@ -# Generated by conda-lock. -# platform: linux-64 -# input_hash: 47df5795e1fabb6dd4cb7acb7d5ab271c59d2d0d9aff199c256913c17f5169d1 - -channels: - - conda-forge - - nodefaults -dependencies: - - _openmp_mutex=4.5=6_kmp_llvm - - alabaster=0.7.16=pyhd8ed1ab_0 - - annotated-types=0.7.0=pyhd8ed1ab_1 - - anyio=4.11.0=pyhcf101f3_0 - - argon2-cffi=25.1.0=pyhd8ed1ab_0 - - argon2-cffi-bindings=25.1.0=py311h49ec1c0_2 - - arrow=1.4.0=pyhcf101f3_0 - - asciitree=0.3.3=py_2 - - astroid=4.0.2=py311h38be061_0 - - asttokens=3.0.1=pyhd8ed1ab_0 - - async-lru=2.0.5=pyh29332c3_0 - - attrs=25.4.0=pyh71513ae_0 - - babel=2.17.0=pyhd8ed1ab_0 - - beautifulsoup4=4.14.2=pyha770c72_0 - - bleach=6.3.0=pyhcf101f3_0 - - bleach-with-css=6.3.0=h5f6438b_0 - - bokeh=3.6.3=pyhd8ed1ab_0 - - brotli=1.2.0=h41a2e66_0 - - brotli-bin=1.2.0=hf2c8021_0 - - brotli-python=1.2.0=py311h7c6b74e_0 - - bzip2=1.0.8=hda65f42_8 - - c-ares=1.34.5=hb9d3cd8_0 - - ca-certificates=2025.11.12=hbd8a1cb_0 - - cached-property=1.5.2=hd8ed1ab_1 - - cached_property=1.5.2=pyha770c72_1 - - certifi=2025.11.12=pyhd8ed1ab_0 - - cffi=2.0.0=py311h03d9500_1 - - charset-normalizer=3.4.4=pyhd8ed1ab_0 - - click=8.3.1=pyh707e725_0 - - cloudpickle=3.1.2=pyhd8ed1ab_0 - - colorama=0.4.6=pyhd8ed1ab_1 - - comm=0.2.3=pyhe01879c_0 - - contourpy=1.3.3=py311hdf67eae_3 - - coverage=7.12.0=py311h3778330_0 - - cycler=0.12.1=pyhd8ed1ab_1 - - cytoolz=1.1.0=py311h49ec1c0_1 - - dask-core=2025.3.0=pyhd8ed1ab_0 - - debugpy=1.8.17=py311hc665b79_0 - - decorator=5.2.1=pyhd8ed1ab_0 - - defusedxml=0.7.1=pyhd8ed1ab_0 - - deprecated=1.3.1=pyhd8ed1ab_0 - - dill=0.4.0=pyhd8ed1ab_0 - - discretize=0.11.3=py311h1d5f577_1 - - distributed=2025.3.0=pyhd8ed1ab_0 - - docutils=0.19=py311h38be061_1 - - exceptiongroup=1.3.0=pyhd8ed1ab_0 - - executing=2.2.1=pyhd8ed1ab_0 - - fasteners=0.19=pyhd8ed1ab_1 - - fonttools=4.60.1=py311h3778330_0 - - fqdn=1.5.1=pyhd8ed1ab_1 - - freetype=2.14.1=ha770c72_0 - - fsspec=2025.10.0=pyhd8ed1ab_0 - - geoana=0.7.2=py311h1d5f577_1 - - h11=0.16.0=pyhd8ed1ab_0 - - h2=4.3.0=pyhcf101f3_0 - - h5py=3.15.1=nompi_py311h0b2f468_100 - - hdf5=1.14.6=nompi_h6e4c0c1_103 - - hpack=4.1.0=pyhd8ed1ab_0 - - httpcore=1.0.9=pyh29332c3_0 - - httpx=0.28.1=pyhd8ed1ab_0 - - hyperframe=6.1.0=pyhd8ed1ab_0 - - icu=75.1=he02047a_0 - - idna=3.11=pyhd8ed1ab_0 - - imagesize=1.4.1=pyhd8ed1ab_0 - - importlib-metadata=8.7.0=pyhe01879c_1 - - importlib_resources=6.5.2=pyhd8ed1ab_0 - - iniconfig=2.3.0=pyhd8ed1ab_0 - - ipykernel=7.1.0=pyha191276_0 - - ipython=9.7.0=pyh53cf698_0 - - ipython_genutils=0.2.0=pyhd8ed1ab_2 - - ipython_pygments_lexers=1.1.1=pyhd8ed1ab_0 - - ipywidgets=7.8.5=pyhd8ed1ab_0 - - isoduration=20.11.0=pyhd8ed1ab_1 - - isort=7.0.0=pyhd8ed1ab_0 - - jedi=0.19.2=pyhd8ed1ab_1 - - jinja2=3.1.6=pyhd8ed1ab_0 - - joblib=1.5.2=pyhd8ed1ab_0 - - json5=0.12.1=pyhd8ed1ab_0 - - jsonpointer=3.0.0=py311h38be061_2 - - jsonschema=4.25.1=pyhe01879c_0 - - jsonschema-specifications=2025.9.1=pyhcf101f3_0 - - jsonschema-with-format-nongpl=4.25.1=he01879c_0 - - jupyter-book=2.0.2=pyhcf101f3_0 - - jupyter-lsp=2.3.0=pyhcf101f3_0 - - jupyter_client=8.6.3=pyhd8ed1ab_1 - - jupyter_core=5.9.1=pyhc90fa1f_0 - - jupyter_events=0.12.0=pyh29332c3_0 - - jupyter_server=2.17.0=pyhcf101f3_0 - - jupyter_server_terminals=0.5.3=pyhd8ed1ab_1 - - jupyterlab=4.5.0=pyhd8ed1ab_0 - - jupyterlab_pygments=0.3.0=pyhd8ed1ab_2 - - jupyterlab_server=2.28.0=pyhcf101f3_0 - - jupyterlab_widgets=1.1.11=pyhd8ed1ab_0 - - jupytext=1.18.1=pyh80e38bb_0 - - keyutils=1.6.3=hb9d3cd8_0 - - kiwisolver=1.4.9=py311h724c32c_2 - - krb5=1.21.3=h659f571_0 - - lark=1.3.1=pyhd8ed1ab_0 - - lcms2=2.17=h717163a_0 - - ld_impl_linux-64=2.45=h1aa0949_0 - - lerc=4.0.0=h0aef613_1 - - libaec=1.1.4=h3f801dc_0 - - libblas=3.9.0=37_h5875eb1_mkl - - libbrotlicommon=1.2.0=h09219d5_0 - - libbrotlidec=1.2.0=hd53d788_0 - - libbrotlienc=1.2.0=h02bd7ab_0 - - libcblas=3.9.0=37_hfef963f_mkl - - libcurl=8.17.0=h4e3cde8_0 - - libdeflate=1.25=h17f619e_0 - - libdlf=0.3.0=pyhd8ed1ab_1 - - libedit=3.1.20250104=pl5321h7949ede_0 - - libev=4.33=hd590300_2 - - libexpat=2.7.3=hecca717_0 - - libffi=3.5.2=h9ec8514_0 - - libfreetype=2.14.1=ha770c72_0 - - libfreetype6=2.14.1=h73754d4_0 - - libgcc=15.2.0=h767d61c_7 - - libgcc-ng=15.2.0=h69a702a_7 - - libgfortran=15.2.0=h69a702a_7 - - libgfortran5=15.2.0=hcd61629_7 - - libhwloc=2.12.1=default_h7f8ec31_1002 - - libiconv=1.18=h3b78370_2 - - libjpeg-turbo=3.1.2=hb03c661_0 - - liblapack=3.9.0=37_h5e43f62_mkl - - liblzma=5.8.1=hb9d3cd8_2 - - libnghttp2=1.67.0=had1ee68_0 - - libnsl=2.0.1=hb9d3cd8_1 - - libpng=1.6.50=h421ea60_1 - - libscotch=7.0.6=hea33c07_1 - - libsodium=1.0.20=h4ab18f5_0 - - libspatialindex=2.0.0=he02047a_0 - - libsqlite=3.51.0=hee844dc_0 - - libssh2=1.11.1=hcf80075_0 - - libstdcxx=15.2.0=h8f9b012_7 - - libstdcxx-ng=15.2.0=h4852527_7 - - libtiff=4.7.1=h9d88235_1 - - libuuid=2.41.2=he9a06e4_0 - - libuv=1.51.0=hb03c661_1 - - libwebp-base=1.6.0=hd42ef1d_0 - - libxcb=1.17.0=h8a09558_0 - - libxcrypt=4.4.36=hd590300_1 - - libxml2=2.15.1=h26afc86_0 - - libxml2-16=2.15.1=ha9997c6_0 - - libzlib=1.3.1=hb9d3cd8_2 - - llvm-openmp=21.1.6=h4922eb0_0 - - locket=1.0.0=pyhd8ed1ab_0 - - markdown-it-py=4.0.0=pyhd8ed1ab_0 - - markupsafe=3.0.3=py311h3778330_0 - - matplotlib-base=3.8.4=py311ha4ca890_2 - - matplotlib-inline=0.2.1=pyhd8ed1ab_0 - - mccabe=0.7.0=pyhd8ed1ab_1 - - mdit-py-plugins=0.5.0=pyhd8ed1ab_0 - - mdurl=0.1.2=pyhd8ed1ab_1 - - metis=5.1.0=hd0bcaf9_1007 - - mistune=3.1.4=pyhcf101f3_0 - - mkl=2024.2.2=ha770c72_17 - - msgpack-python=1.1.2=py311hdf67eae_1 - - mumps-include=5.7.3=h82cca05_10 - - mumps-seq=5.7.3=h06cbf8f_10 - - munkres=1.1.4=pyhd8ed1ab_1 - - nbclient=0.10.2=pyhd8ed1ab_0 - - nbconvert=7.16.6=hc388f54_1 - - nbconvert-core=7.16.6=pyhcf101f3_1 - - nbconvert-pandoc=7.16.6=h7d6f222_1 - - nbformat=5.10.4=pyhd8ed1ab_1 - - ncurses=6.5=h2d0b736_3 - - nest-asyncio=1.6.0=pyhd8ed1ab_1 - - nodejs=22.6.0=hc19f0b3_1 - - notebook=7.5.0=pyhcf101f3_0 - - notebook-shim=0.2.4=pyhd8ed1ab_1 - - numcodecs=0.15.1=py311h7db5c69_0 - - numpy=1.26.4=py311h64a7726_0 - - openjpeg=2.5.4=h55fea9a_0 - - openssl=3.6.0=h26f9b46_0 - - overrides=7.7.0=pyhd8ed1ab_1 - - packaging=25.0=pyh29332c3_1 - - pandas=2.3.3=py311hed34c8f_1 - - pandoc=3.8.2.1=ha770c72_0 - - pandocfilters=1.5.0=pyhd8ed1ab_0 - - parso=0.8.5=pyhcf101f3_0 - - partd=1.4.2=pyhd8ed1ab_0 - - pexpect=4.9.0=pyhd8ed1ab_1 - - pillow=10.3.0=py311h82a398c_1 - - pip=25.3=pyh8b19718_0 - - platformdirs=4.5.0=pyhcf101f3_0 - - pluggy=1.6.0=pyhd8ed1ab_0 - - prometheus_client=0.23.1=pyhd8ed1ab_0 - - prompt-toolkit=3.0.52=pyha770c72_0 - - psutil=7.1.3=py311haee01d2_0 - - pthread-stubs=0.4=hb9d3cd8_1002 - - ptyprocess=0.7.0=pyhd8ed1ab_1 - - pure_eval=0.2.3=pyhd8ed1ab_1 - - pycparser=2.22=pyh29332c3_1 - - pydantic=2.12.4=pyh3cfb1c2_0 - - pydantic-core=2.41.5=py311h902ca64_1 - - pydiso=0.1.2=py311h6070e36_1 - - pygments=2.19.2=pyhd8ed1ab_0 - - pylint=4.0.3=pyhcf101f3_0 - - pymatsolver=0.3.1=pyh48887ae_201 - - pyparsing=3.2.5=pyhcf101f3_0 - - pysocks=1.7.1=pyha55dd90_7 - - pytest=9.0.1=pyhcf101f3_0 - - pytest-cov=7.0.0=pyhcf101f3_1 - - python=3.11.14=hd63d673_2_cpython - - python-dateutil=2.9.0.post0=pyhe01879c_2 - - python-fastjsonschema=2.21.2=pyhe01879c_0 - - python-json-logger=2.0.7=pyhd8ed1ab_0 - - python-mumps=0.0.3=py311h4b558b0_0 - - python-tzdata=2025.2=pyhd8ed1ab_0 - - python_abi=3.11=8_cp311 - - pytz=2025.2=pyhd8ed1ab_0 - - pyyaml=6.0.3=py311h3778330_0 - - pyzmq=27.1.0=py311h2315fbb_0 - - readline=8.2=h8c095d6_2 - - readthedocs-sphinx-ext=2.2.5=pyhd8ed1ab_1 - - referencing=0.37.0=pyhcf101f3_0 - - requests=2.32.5=pyhd8ed1ab_0 - - rfc3339-validator=0.1.4=pyhd8ed1ab_1 - - rfc3986-validator=0.1.1=pyh9f0ad1d_0 - - rfc3987-syntax=1.1.0=pyhe01879c_1 - - rpds-py=0.29.0=py311h902ca64_0 - - rtree=1.2.0=py311ha1603b9_1 - - scikit-learn=1.6.1=py311h57cc02b_0 - - scipy=1.14.1=py311he9a78e4_2 - - send2trash=1.8.3=pyh0d859eb_1 - - setuptools=80.9.0=pyhff2d567_0 - - six=1.17.0=pyhe01879c_1 - - sniffio=1.3.1=pyhd8ed1ab_2 - - snowballstemmer=3.0.1=pyhd8ed1ab_0 - - sortedcontainers=2.4.0=pyhd8ed1ab_1 - - soupsieve=2.8=pyhd8ed1ab_0 - - sphinx=5.3.0=pyhd8ed1ab_0 - - sphinxcontrib-applehelp=2.0.0=pyhd8ed1ab_1 - - sphinxcontrib-devhelp=2.0.0=pyhd8ed1ab_1 - - sphinxcontrib-htmlhelp=2.1.0=pyhd8ed1ab_1 - - sphinxcontrib-jsmath=1.0.1=pyhd8ed1ab_1 - - sphinxcontrib-qthelp=2.0.0=pyhd8ed1ab_1 - - sphinxcontrib-serializinghtml=1.1.10=pyhd8ed1ab_1 - - stack_data=0.6.3=pyhd8ed1ab_1 - - tbb=2021.13.0=h8d10470_4 - - tblib=3.2.2=pyhcf101f3_0 - - terminado=0.18.1=pyh0d859eb_0 - - threadpoolctl=3.6.0=pyhecae5ae_0 - - tinycss2=1.5.0=pyhcf101f3_0 - - tk=8.6.13=noxft_ha0e22de_103 - - tomli=2.3.0=pyhcf101f3_0 - - tomlkit=0.13.3=pyha770c72_0 - - toolz=1.1.0=pyhd8ed1ab_1 - - tornado=6.5.2=py311h49ec1c0_2 - - tqdm=4.67.1=pyhd8ed1ab_1 - - traitlets=5.14.3=pyhd8ed1ab_1 - - trimesh=4.1.8=pyhd8ed1ab_0 - - typing-extensions=4.15.0=h396c80c_0 - - typing-inspection=0.4.2=pyhd8ed1ab_0 - - typing_extensions=4.15.0=pyhcf101f3_0 - - typing_utils=0.1.0=pyhd8ed1ab_1 - - tzdata=2025b=h78e105d_0 - - unicodedata2=17.0.0=py311h49ec1c0_1 - - uri-template=1.3.0=pyhd8ed1ab_1 - - urllib3=2.5.0=pyhd8ed1ab_0 - - wcwidth=0.2.14=pyhd8ed1ab_0 - - webcolors=25.10.0=pyhd8ed1ab_0 - - webencodings=0.5.1=pyhd8ed1ab_3 - - websocket-client=1.9.0=pyhd8ed1ab_0 - - wheel=0.45.1=pyhd8ed1ab_1 - - widgetsnbextension=3.6.10=pyhd8ed1ab_0 - - wrapt=1.17.3=py311h49ec1c0_1 - - xorg-libxau=1.0.12=hb03c661_1 - - xorg-libxdmcp=1.1.5=hb03c661_1 - - xyzservices=2025.10.0=pyhd8ed1ab_0 - - yaml=0.2.5=h280c20c_3 - - zarr=2.14.2=pyhd8ed1ab_0 - - zeromq=4.3.5=h387f397_9 - - zict=3.0.0=pyhd8ed1ab_1 - - zipp=3.23.0=pyhd8ed1ab_0 - - zlib=1.3.1=hb9d3cd8_2 - - zstandard=0.25.0=py311haee01d2_1 - - zstd=1.5.7=hb8e6e7a_2 - - pip: - - geoapps-utils @ git+https://github.com/MiraGeoscience/geoapps-utils.git@15d04763f768cb6f56a3049c9c83a12c88f3060f - - geoh5py @ git+https://github.com/MiraGeoscience/geoh5py.git@6e27ace156c5f5898a77ae96566dea1d90de8cd8 - - grid-apps @ git+https://github.com/MiraGeoscience/grid-apps.git@d6a42611003c184354e1367de41a88783b928166 - - mira-simpeg @ git+https://github.com/MiraGeoscience/simpeg.git@374bd3eb0266841ae256ff8fdbf96cfa6d20f469 - -variables: - KMP_WARNINGS: 0 diff --git a/environments/py-3.11-linux-64.conda.lock.yml b/environments/py-3.11-linux-64.conda.lock.yml deleted file mode 100644 index 6b9db877..00000000 --- a/environments/py-3.11-linux-64.conda.lock.yml +++ /dev/null @@ -1,169 +0,0 @@ -# Generated by conda-lock. -# platform: linux-64 -# input_hash: 47df5795e1fabb6dd4cb7acb7d5ab271c59d2d0d9aff199c256913c17f5169d1 - -channels: - - conda-forge - - nodefaults -dependencies: - - _openmp_mutex=4.5=6_kmp_llvm - - annotated-types=0.7.0=pyhd8ed1ab_1 - - asciitree=0.3.3=py_2 - - bokeh=3.6.3=pyhd8ed1ab_0 - - brotli=1.2.0=h41a2e66_0 - - brotli-bin=1.2.0=hf2c8021_0 - - brotli-python=1.2.0=py311h7c6b74e_0 - - bzip2=1.0.8=hda65f42_8 - - c-ares=1.34.5=hb9d3cd8_0 - - ca-certificates=2025.11.12=hbd8a1cb_0 - - cached-property=1.5.2=hd8ed1ab_1 - - cached_property=1.5.2=pyha770c72_1 - - certifi=2025.11.12=pyhd8ed1ab_0 - - cffi=2.0.0=py311h03d9500_1 - - click=8.3.1=pyh707e725_0 - - cloudpickle=3.1.2=pyhd8ed1ab_0 - - colorama=0.4.6=pyhd8ed1ab_1 - - contourpy=1.3.3=py311hdf67eae_3 - - cycler=0.12.1=pyhd8ed1ab_1 - - cytoolz=1.1.0=py311h49ec1c0_1 - - dask-core=2025.3.0=pyhd8ed1ab_0 - - deprecated=1.3.1=pyhd8ed1ab_0 - - discretize=0.11.3=py311h1d5f577_1 - - distributed=2025.3.0=pyhd8ed1ab_0 - - fasteners=0.19=pyhd8ed1ab_1 - - fonttools=4.60.1=py311h3778330_0 - - freetype=2.14.1=ha770c72_0 - - fsspec=2025.10.0=pyhd8ed1ab_0 - - geoana=0.7.2=py311h1d5f577_1 - - h2=4.3.0=pyhcf101f3_0 - - h5py=3.15.1=nompi_py311h0b2f468_100 - - hdf5=1.14.6=nompi_h6e4c0c1_103 - - hpack=4.1.0=pyhd8ed1ab_0 - - hyperframe=6.1.0=pyhd8ed1ab_0 - - icu=75.1=he02047a_0 - - importlib-metadata=8.7.0=pyhe01879c_1 - - jinja2=3.1.6=pyhd8ed1ab_0 - - joblib=1.5.2=pyhd8ed1ab_0 - - keyutils=1.6.3=hb9d3cd8_0 - - kiwisolver=1.4.9=py311h724c32c_2 - - krb5=1.21.3=h659f571_0 - - lcms2=2.17=h717163a_0 - - ld_impl_linux-64=2.45=h1aa0949_0 - - lerc=4.0.0=h0aef613_1 - - libaec=1.1.4=h3f801dc_0 - - libblas=3.9.0=37_h5875eb1_mkl - - libbrotlicommon=1.2.0=h09219d5_0 - - libbrotlidec=1.2.0=hd53d788_0 - - libbrotlienc=1.2.0=h02bd7ab_0 - - libcblas=3.9.0=37_hfef963f_mkl - - libcurl=8.17.0=h4e3cde8_0 - - libdeflate=1.25=h17f619e_0 - - libdlf=0.3.0=pyhd8ed1ab_1 - - libedit=3.1.20250104=pl5321h7949ede_0 - - libev=4.33=hd590300_2 - - libexpat=2.7.3=hecca717_0 - - libffi=3.5.2=h9ec8514_0 - - libfreetype=2.14.1=ha770c72_0 - - libfreetype6=2.14.1=h73754d4_0 - - libgcc=15.2.0=h767d61c_7 - - libgcc-ng=15.2.0=h69a702a_7 - - libgfortran=15.2.0=h69a702a_7 - - libgfortran5=15.2.0=hcd61629_7 - - libhwloc=2.12.1=default_h7f8ec31_1002 - - libiconv=1.18=h3b78370_2 - - libjpeg-turbo=3.1.2=hb03c661_0 - - liblapack=3.9.0=37_h5e43f62_mkl - - liblzma=5.8.1=hb9d3cd8_2 - - libnghttp2=1.67.0=had1ee68_0 - - libnsl=2.0.1=hb9d3cd8_1 - - libpng=1.6.50=h421ea60_1 - - libscotch=7.0.6=hea33c07_1 - - libspatialindex=2.0.0=he02047a_0 - - libsqlite=3.51.0=hee844dc_0 - - libssh2=1.11.1=hcf80075_0 - - libstdcxx=15.2.0=h8f9b012_7 - - libstdcxx-ng=15.2.0=h4852527_7 - - libtiff=4.7.1=h9d88235_1 - - libuuid=2.41.2=he9a06e4_0 - - libwebp-base=1.6.0=hd42ef1d_0 - - libxcb=1.17.0=h8a09558_0 - - libxcrypt=4.4.36=hd590300_1 - - libxml2=2.15.1=h26afc86_0 - - libxml2-16=2.15.1=ha9997c6_0 - - libzlib=1.3.1=hb9d3cd8_2 - - llvm-openmp=21.1.6=h4922eb0_0 - - locket=1.0.0=pyhd8ed1ab_0 - - markupsafe=3.0.3=py311h3778330_0 - - matplotlib-base=3.8.4=py311ha4ca890_2 - - metis=5.1.0=hd0bcaf9_1007 - - mkl=2024.2.2=ha770c72_17 - - msgpack-python=1.1.2=py311hdf67eae_1 - - mumps-include=5.7.3=h82cca05_10 - - mumps-seq=5.7.3=h06cbf8f_10 - - munkres=1.1.4=pyhd8ed1ab_1 - - ncurses=6.5=h2d0b736_3 - - numcodecs=0.15.1=py311h7db5c69_0 - - numpy=1.26.4=py311h64a7726_0 - - openjpeg=2.5.4=h55fea9a_0 - - openssl=3.6.0=h26f9b46_0 - - packaging=25.0=pyh29332c3_1 - - pandas=2.3.3=py311hed34c8f_1 - - partd=1.4.2=pyhd8ed1ab_0 - - pillow=10.3.0=py311h82a398c_1 - - pip=25.3=pyh8b19718_0 - - psutil=7.1.3=py311haee01d2_0 - - pthread-stubs=0.4=hb9d3cd8_1002 - - pycparser=2.22=pyh29332c3_1 - - pydantic=2.12.4=pyh3cfb1c2_0 - - pydantic-core=2.41.5=py311h902ca64_1 - - pydiso=0.1.2=py311h6070e36_1 - - pymatsolver=0.3.1=pyh48887ae_201 - - pyparsing=3.2.5=pyhcf101f3_0 - - pysocks=1.7.1=pyha55dd90_7 - - python=3.11.14=hd63d673_2_cpython - - python-dateutil=2.9.0.post0=pyhe01879c_2 - - python-mumps=0.0.3=py311h4b558b0_0 - - python-tzdata=2025.2=pyhd8ed1ab_0 - - python_abi=3.11=8_cp311 - - pytz=2025.2=pyhd8ed1ab_0 - - pyyaml=6.0.3=py311h3778330_0 - - readline=8.2=h8c095d6_2 - - rtree=1.2.0=py311ha1603b9_1 - - scikit-learn=1.6.1=py311h57cc02b_0 - - scipy=1.14.1=py311he9a78e4_2 - - setuptools=80.9.0=pyhff2d567_0 - - six=1.17.0=pyhe01879c_1 - - sortedcontainers=2.4.0=pyhd8ed1ab_1 - - tbb=2021.13.0=h8d10470_4 - - tblib=3.2.2=pyhcf101f3_0 - - threadpoolctl=3.6.0=pyhecae5ae_0 - - tk=8.6.13=noxft_ha0e22de_103 - - toolz=1.1.0=pyhd8ed1ab_1 - - tornado=6.5.2=py311h49ec1c0_2 - - tqdm=4.67.1=pyhd8ed1ab_1 - - trimesh=4.1.8=pyhd8ed1ab_0 - - typing-extensions=4.15.0=h396c80c_0 - - typing-inspection=0.4.2=pyhd8ed1ab_0 - - typing_extensions=4.15.0=pyhcf101f3_0 - - tzdata=2025b=h78e105d_0 - - unicodedata2=17.0.0=py311h49ec1c0_1 - - urllib3=2.5.0=pyhd8ed1ab_0 - - wheel=0.45.1=pyhd8ed1ab_1 - - wrapt=1.17.3=py311h49ec1c0_1 - - xorg-libxau=1.0.12=hb03c661_1 - - xorg-libxdmcp=1.1.5=hb03c661_1 - - xyzservices=2025.10.0=pyhd8ed1ab_0 - - yaml=0.2.5=h280c20c_3 - - zarr=2.14.2=pyhd8ed1ab_0 - - zict=3.0.0=pyhd8ed1ab_1 - - zipp=3.23.0=pyhd8ed1ab_0 - - zstandard=0.25.0=py311haee01d2_1 - - zstd=1.5.7=hb8e6e7a_2 - - pip: - - geoapps-utils @ git+https://github.com/MiraGeoscience/geoapps-utils.git@15d04763f768cb6f56a3049c9c83a12c88f3060f - - geoh5py @ git+https://github.com/MiraGeoscience/geoh5py.git@6e27ace156c5f5898a77ae96566dea1d90de8cd8 - - grid-apps @ git+https://github.com/MiraGeoscience/grid-apps.git@d6a42611003c184354e1367de41a88783b928166 - - mira-simpeg @ git+https://github.com/MiraGeoscience/simpeg.git@374bd3eb0266841ae256ff8fdbf96cfa6d20f469 - -variables: - KMP_WARNINGS: 0 diff --git a/environments/py-3.11-win-64-dev.conda.lock.yml b/environments/py-3.11-win-64-dev.conda.lock.yml deleted file mode 100644 index 974af290..00000000 --- a/environments/py-3.11-win-64-dev.conda.lock.yml +++ /dev/null @@ -1,280 +0,0 @@ -# Generated by conda-lock. -# platform: win-64 -# input_hash: ee33255c0e6d79088a9488622661e4c8bb0064adc36e330771a8a3be1c8eb401 - -channels: - - conda-forge - - nodefaults -dependencies: - - _openmp_mutex=4.5=2_gnu - - alabaster=0.7.16=pyhd8ed1ab_0 - - annotated-types=0.7.0=pyhd8ed1ab_1 - - anyio=4.11.0=pyhcf101f3_0 - - argon2-cffi=25.1.0=pyhd8ed1ab_0 - - argon2-cffi-bindings=25.1.0=py311h3485c13_2 - - arrow=1.4.0=pyhcf101f3_0 - - asciitree=0.3.3=py_2 - - astroid=4.0.2=py311h1ea47a8_0 - - asttokens=3.0.1=pyhd8ed1ab_0 - - async-lru=2.0.5=pyh29332c3_0 - - attrs=25.4.0=pyh71513ae_0 - - babel=2.17.0=pyhd8ed1ab_0 - - beautifulsoup4=4.14.2=pyha770c72_0 - - bleach=6.3.0=pyhcf101f3_0 - - bleach-with-css=6.3.0=h5f6438b_0 - - bokeh=3.6.3=pyhd8ed1ab_0 - - brotli=1.2.0=h17ff524_0 - - brotli-bin=1.2.0=h6910e44_0 - - brotli-python=1.2.0=py311h69b5583_0 - - bzip2=1.0.8=h0ad9c76_8 - - ca-certificates=2025.11.12=h4c7d964_0 - - cached-property=1.5.2=hd8ed1ab_1 - - cached_property=1.5.2=pyha770c72_1 - - certifi=2025.11.12=pyhd8ed1ab_0 - - cffi=2.0.0=py311h3485c13_1 - - charset-normalizer=3.4.4=pyhd8ed1ab_0 - - click=8.3.1=pyh7428d3b_0 - - cloudpickle=3.1.2=pyhd8ed1ab_0 - - colorama=0.4.6=pyhd8ed1ab_1 - - comm=0.2.3=pyhe01879c_0 - - contourpy=1.3.3=py311h3fd045d_3 - - coverage=7.12.0=py311h3f79411_0 - - cycler=0.12.1=pyhd8ed1ab_1 - - cytoolz=1.1.0=py311h3485c13_1 - - dask-core=2025.3.0=pyhd8ed1ab_0 - - debugpy=1.8.17=py311h5dfdfe8_0 - - decorator=5.2.1=pyhd8ed1ab_0 - - defusedxml=0.7.1=pyhd8ed1ab_0 - - deprecated=1.3.1=pyhd8ed1ab_0 - - dill=0.4.0=pyhd8ed1ab_0 - - discretize=0.11.3=py311h05ac4f6_1 - - distributed=2025.3.0=pyhd8ed1ab_0 - - docutils=0.19=py311h1ea47a8_1 - - exceptiongroup=1.3.0=pyhd8ed1ab_0 - - executing=2.2.1=pyhd8ed1ab_0 - - fasteners=0.19=pyhd8ed1ab_1 - - fonttools=4.60.1=py311h3f79411_0 - - fqdn=1.5.1=pyhd8ed1ab_1 - - freetype=2.14.1=h57928b3_0 - - fsspec=2025.10.0=pyhd8ed1ab_0 - - geoana=0.7.2=py311h05ac4f6_1 - - h11=0.16.0=pyhd8ed1ab_0 - - h2=4.3.0=pyhcf101f3_0 - - h5py=3.15.1=nompi_py311hc40ba4b_100 - - hdf5=1.14.6=nompi_he30205f_103 - - hpack=4.1.0=pyhd8ed1ab_0 - - httpcore=1.0.9=pyh29332c3_0 - - httpx=0.28.1=pyhd8ed1ab_0 - - hyperframe=6.1.0=pyhd8ed1ab_0 - - idna=3.11=pyhd8ed1ab_0 - - imagesize=1.4.1=pyhd8ed1ab_0 - - importlib-metadata=8.7.0=pyhe01879c_1 - - importlib_resources=6.5.2=pyhd8ed1ab_0 - - iniconfig=2.3.0=pyhd8ed1ab_0 - - ipykernel=7.1.0=pyh6dadd2b_0 - - ipython=9.7.0=pyhe2676ad_0 - - ipython_genutils=0.2.0=pyhd8ed1ab_2 - - ipython_pygments_lexers=1.1.1=pyhd8ed1ab_0 - - ipywidgets=7.8.5=pyhd8ed1ab_0 - - isoduration=20.11.0=pyhd8ed1ab_1 - - isort=7.0.0=pyhd8ed1ab_0 - - jedi=0.19.2=pyhd8ed1ab_1 - - jinja2=3.1.6=pyhd8ed1ab_0 - - joblib=1.5.2=pyhd8ed1ab_0 - - json5=0.12.1=pyhd8ed1ab_0 - - jsonpointer=3.0.0=py311h1ea47a8_2 - - jsonschema=4.25.1=pyhe01879c_0 - - jsonschema-specifications=2025.9.1=pyhcf101f3_0 - - jsonschema-with-format-nongpl=4.25.1=he01879c_0 - - jupyter-book=2.0.2=pyhcf101f3_0 - - jupyter-lsp=2.3.0=pyhcf101f3_0 - - jupyter_client=8.6.3=pyhd8ed1ab_1 - - jupyter_core=5.9.1=pyh6dadd2b_0 - - jupyter_events=0.12.0=pyh29332c3_0 - - jupyter_server=2.17.0=pyhcf101f3_0 - - jupyter_server_terminals=0.5.3=pyhd8ed1ab_1 - - jupyterlab=4.5.0=pyhd8ed1ab_0 - - jupyterlab_pygments=0.3.0=pyhd8ed1ab_2 - - jupyterlab_server=2.28.0=pyhcf101f3_0 - - jupyterlab_widgets=1.1.11=pyhd8ed1ab_0 - - jupytext=1.18.1=pyh80e38bb_0 - - kiwisolver=1.4.9=py311h275cad7_2 - - krb5=1.21.3=hdf4eb48_0 - - lark=1.3.1=pyhd8ed1ab_0 - - lcms2=2.17=hbcf6048_0 - - lerc=4.0.0=h6470a55_1 - - libaec=1.1.4=h20038f6_0 - - libblas=3.9.0=35_h5709861_mkl - - libbrotlicommon=1.2.0=hc82b238_0 - - libbrotlidec=1.2.0=h431afc6_0 - - libbrotlienc=1.2.0=ha521d6b_0 - - libcblas=3.9.0=35_h2a3cdd5_mkl - - libcurl=8.17.0=h43ecb02_0 - - libdeflate=1.25=h51727cc_0 - - libdlf=0.3.0=pyhd8ed1ab_1 - - libexpat=2.7.3=hac47afa_0 - - libffi=3.5.2=h52bdfb6_0 - - libfreetype=2.14.1=h57928b3_0 - - libfreetype6=2.14.1=hdbac1cb_0 - - libgcc=15.2.0=h1383e82_7 - - libgomp=15.2.0=h1383e82_7 - - libhwloc=2.12.1=default_h64bd3f2_1002 - - libiconv=1.18=hc1393d2_2 - - libjpeg-turbo=3.1.2=hfd05255_0 - - liblapack=3.9.0=35_hf9ab0e9_mkl - - liblzma=5.8.1=h2466b09_2 - - libpng=1.6.50=h7351971_1 - - libsodium=1.0.20=hc70643c_0 - - libspatialindex=2.0.0=h5a68840_0 - - libsqlite=3.51.0=hf5d6505_0 - - libssh2=1.11.1=h9aa295b_0 - - libtiff=4.7.1=h8f73337_1 - - libwebp-base=1.6.0=h4d5522a_0 - - libwinpthread=12.0.0.r4.gg4f2fc60ca=h57928b3_10 - - libxcb=1.17.0=h0e4246c_0 - - libxml2=2.15.1=h5d26750_0 - - libxml2-16=2.15.1=h692994f_0 - - libzlib=1.3.1=h2466b09_2 - - llvm-openmp=21.1.6=h4fa8253_0 - - locket=1.0.0=pyhd8ed1ab_0 - - markdown-it-py=4.0.0=pyhd8ed1ab_0 - - markupsafe=3.0.3=py311h3f79411_0 - - matplotlib-base=3.8.4=py311h9b31f6e_2 - - matplotlib-inline=0.2.1=pyhd8ed1ab_0 - - mccabe=0.7.0=pyhd8ed1ab_1 - - mdit-py-plugins=0.5.0=pyhd8ed1ab_0 - - mdurl=0.1.2=pyhd8ed1ab_1 - - mistune=3.1.4=pyhcf101f3_0 - - mkl=2024.2.2=h57928b3_16 - - msgpack-python=1.1.2=py311h3fd045d_1 - - mumps-seq=5.7.3=hbaa6519_10 - - munkres=1.1.4=pyhd8ed1ab_1 - - nbclient=0.10.2=pyhd8ed1ab_0 - - nbconvert=7.16.6=hc388f54_1 - - nbconvert-core=7.16.6=pyhcf101f3_1 - - nbconvert-pandoc=7.16.6=h7d6f222_1 - - nbformat=5.10.4=pyhd8ed1ab_1 - - nest-asyncio=1.6.0=pyhd8ed1ab_1 - - nodejs=24.9.0=he453025_0 - - notebook=7.5.0=pyhcf101f3_0 - - notebook-shim=0.2.4=pyhd8ed1ab_1 - - numcodecs=0.15.1=py311hcf9f919_0 - - numpy=1.26.4=py311h0b4df5a_0 - - openjpeg=2.5.4=h24db6dd_0 - - openssl=3.6.0=h725018a_0 - - overrides=7.7.0=pyhd8ed1ab_1 - - packaging=25.0=pyh29332c3_1 - - pandas=2.3.3=py311h11fd7f3_1 - - pandoc=3.8.2.1=h57928b3_0 - - pandocfilters=1.5.0=pyhd8ed1ab_0 - - parso=0.8.5=pyhcf101f3_0 - - partd=1.4.2=pyhd8ed1ab_0 - - pillow=10.3.0=py311h5592be9_1 - - pip=25.3=pyh8b19718_0 - - platformdirs=4.5.0=pyhcf101f3_0 - - pluggy=1.6.0=pyhd8ed1ab_0 - - prometheus_client=0.23.1=pyhd8ed1ab_0 - - prompt-toolkit=3.0.52=pyha770c72_0 - - psutil=7.1.3=py311hf893f09_0 - - pthread-stubs=0.4=h0e40799_1002 - - pure_eval=0.2.3=pyhd8ed1ab_1 - - pycparser=2.22=pyh29332c3_1 - - pydantic=2.12.4=pyh3cfb1c2_0 - - pydantic-core=2.41.5=py311hf51aa87_1 - - pydiso=0.1.2=py311h1c8cef1_1 - - pygments=2.19.2=pyhd8ed1ab_0 - - pylint=4.0.3=pyhcf101f3_0 - - pymatsolver=0.3.1=pyh48887ae_201 - - pyparsing=3.2.5=pyhcf101f3_0 - - pysocks=1.7.1=pyh09c184e_7 - - pytest=9.0.1=pyhcf101f3_0 - - pytest-cov=7.0.0=pyhcf101f3_1 - - python=3.11.14=h0159041_2_cpython - - python-dateutil=2.9.0.post0=pyhe01879c_2 - - python-fastjsonschema=2.21.2=pyhe01879c_0 - - python-json-logger=2.0.7=pyhd8ed1ab_0 - - python-mumps=0.0.3=py311h5bfbc98_0 - - python-tzdata=2025.2=pyhd8ed1ab_0 - - python_abi=3.11=8_cp311 - - pytz=2025.2=pyhd8ed1ab_0 - - pywin32=311=py311hefeebc8_1 - - pywinpty=2.0.15=py311hda3d55a_1 - - pyyaml=6.0.3=py311h3f79411_0 - - pyzmq=27.1.0=py311hb77b9c8_0 - - readthedocs-sphinx-ext=2.2.5=pyhd8ed1ab_1 - - referencing=0.37.0=pyhcf101f3_0 - - requests=2.32.5=pyhd8ed1ab_0 - - rfc3339-validator=0.1.4=pyhd8ed1ab_1 - - rfc3986-validator=0.1.1=pyh9f0ad1d_0 - - rfc3987-syntax=1.1.0=pyhe01879c_1 - - rpds-py=0.29.0=py311hf51aa87_0 - - rtree=1.2.0=py311h44d53c4_1 - - scikit-learn=1.6.1=py311hdcb8d17_0 - - scipy=1.14.1=py311hf16d85f_2 - - send2trash=1.8.3=pyh5737063_1 - - setuptools=80.9.0=pyhff2d567_0 - - six=1.17.0=pyhe01879c_1 - - sniffio=1.3.1=pyhd8ed1ab_2 - - snowballstemmer=3.0.1=pyhd8ed1ab_0 - - sortedcontainers=2.4.0=pyhd8ed1ab_1 - - soupsieve=2.8=pyhd8ed1ab_0 - - sphinx=5.3.0=pyhd8ed1ab_0 - - sphinxcontrib-applehelp=2.0.0=pyhd8ed1ab_1 - - sphinxcontrib-devhelp=2.0.0=pyhd8ed1ab_1 - - sphinxcontrib-htmlhelp=2.1.0=pyhd8ed1ab_1 - - sphinxcontrib-jsmath=1.0.1=pyhd8ed1ab_1 - - sphinxcontrib-qthelp=2.0.0=pyhd8ed1ab_1 - - sphinxcontrib-serializinghtml=1.1.10=pyhd8ed1ab_1 - - stack_data=0.6.3=pyhd8ed1ab_1 - - tbb=2021.13.0=hd094cb3_4 - - tblib=3.2.2=pyhcf101f3_0 - - terminado=0.18.1=pyh5737063_0 - - threadpoolctl=3.6.0=pyhecae5ae_0 - - tinycss2=1.5.0=pyhcf101f3_0 - - tk=8.6.13=h2c6b04d_3 - - tomli=2.3.0=pyhcf101f3_0 - - tomlkit=0.13.3=pyha770c72_0 - - toolz=1.1.0=pyhd8ed1ab_1 - - tornado=6.5.2=py311h3485c13_2 - - tqdm=4.67.1=pyhd8ed1ab_1 - - traitlets=5.14.3=pyhd8ed1ab_1 - - trimesh=4.1.8=pyhd8ed1ab_0 - - typing-extensions=4.15.0=h396c80c_0 - - typing-inspection=0.4.2=pyhd8ed1ab_0 - - typing_extensions=4.15.0=pyhcf101f3_0 - - typing_utils=0.1.0=pyhd8ed1ab_1 - - tzdata=2025b=h78e105d_0 - - ucrt=10.0.26100.0=h57928b3_0 - - unicodedata2=17.0.0=py311h3485c13_1 - - uri-template=1.3.0=pyhd8ed1ab_1 - - urllib3=2.5.0=pyhd8ed1ab_0 - - vc=14.3=h2b53caa_32 - - vc14_runtime=14.44.35208=h818238b_32 - - vcomp14=14.44.35208=h818238b_32 - - wcwidth=0.2.14=pyhd8ed1ab_0 - - webcolors=25.10.0=pyhd8ed1ab_0 - - webencodings=0.5.1=pyhd8ed1ab_3 - - websocket-client=1.9.0=pyhd8ed1ab_0 - - wheel=0.45.1=pyhd8ed1ab_1 - - widgetsnbextension=3.6.10=pyhd8ed1ab_0 - - win_inet_pton=1.1.0=pyh7428d3b_8 - - winpty=0.4.3=4 - - wrapt=1.17.3=py311h3485c13_1 - - xorg-libxau=1.0.12=hba3369d_1 - - xorg-libxdmcp=1.1.5=hba3369d_1 - - xyzservices=2025.10.0=pyhd8ed1ab_0 - - yaml=0.2.5=h6a83c73_3 - - zarr=2.14.2=pyhd8ed1ab_0 - - zeromq=4.3.5=h5bddc39_9 - - zict=3.0.0=pyhd8ed1ab_1 - - zipp=3.23.0=pyhd8ed1ab_0 - - zstandard=0.25.0=py311hf893f09_1 - - zstd=1.5.7=hbeecb71_2 - - pip: - - geoapps-utils @ git+https://github.com/MiraGeoscience/geoapps-utils.git@15d04763f768cb6f56a3049c9c83a12c88f3060f - - geoh5py @ git+https://github.com/MiraGeoscience/geoh5py.git@6e27ace156c5f5898a77ae96566dea1d90de8cd8 - - grid-apps @ git+https://github.com/MiraGeoscience/grid-apps.git@d6a42611003c184354e1367de41a88783b928166 - - mira-simpeg @ git+https://github.com/MiraGeoscience/simpeg.git@374bd3eb0266841ae256ff8fdbf96cfa6d20f469 - -variables: - KMP_WARNINGS: 0 diff --git a/environments/py-3.11-win-64.conda.lock.yml b/environments/py-3.11-win-64.conda.lock.yml deleted file mode 100644 index 235e6ad4..00000000 --- a/environments/py-3.11-win-64.conda.lock.yml +++ /dev/null @@ -1,156 +0,0 @@ -# Generated by conda-lock. -# platform: win-64 -# input_hash: ee33255c0e6d79088a9488622661e4c8bb0064adc36e330771a8a3be1c8eb401 - -channels: - - conda-forge - - nodefaults -dependencies: - - _openmp_mutex=4.5=2_gnu - - annotated-types=0.7.0=pyhd8ed1ab_1 - - asciitree=0.3.3=py_2 - - bokeh=3.6.3=pyhd8ed1ab_0 - - brotli=1.2.0=h17ff524_0 - - brotli-bin=1.2.0=h6910e44_0 - - brotli-python=1.2.0=py311h69b5583_0 - - bzip2=1.0.8=h0ad9c76_8 - - ca-certificates=2025.11.12=h4c7d964_0 - - cached-property=1.5.2=hd8ed1ab_1 - - cached_property=1.5.2=pyha770c72_1 - - certifi=2025.11.12=pyhd8ed1ab_0 - - cffi=2.0.0=py311h3485c13_1 - - click=8.3.1=pyh7428d3b_0 - - cloudpickle=3.1.2=pyhd8ed1ab_0 - - colorama=0.4.6=pyhd8ed1ab_1 - - contourpy=1.3.3=py311h3fd045d_3 - - cycler=0.12.1=pyhd8ed1ab_1 - - cytoolz=1.1.0=py311h3485c13_1 - - dask-core=2025.3.0=pyhd8ed1ab_0 - - deprecated=1.3.1=pyhd8ed1ab_0 - - discretize=0.11.3=py311h05ac4f6_1 - - distributed=2025.3.0=pyhd8ed1ab_0 - - fasteners=0.19=pyhd8ed1ab_1 - - fonttools=4.60.1=py311h3f79411_0 - - freetype=2.14.1=h57928b3_0 - - fsspec=2025.10.0=pyhd8ed1ab_0 - - geoana=0.7.2=py311h05ac4f6_1 - - h2=4.3.0=pyhcf101f3_0 - - h5py=3.15.1=nompi_py311hc40ba4b_100 - - hdf5=1.14.6=nompi_he30205f_103 - - hpack=4.1.0=pyhd8ed1ab_0 - - hyperframe=6.1.0=pyhd8ed1ab_0 - - importlib-metadata=8.7.0=pyhe01879c_1 - - jinja2=3.1.6=pyhd8ed1ab_0 - - joblib=1.5.2=pyhd8ed1ab_0 - - kiwisolver=1.4.9=py311h275cad7_2 - - krb5=1.21.3=hdf4eb48_0 - - lcms2=2.17=hbcf6048_0 - - lerc=4.0.0=h6470a55_1 - - libaec=1.1.4=h20038f6_0 - - libblas=3.9.0=35_h5709861_mkl - - libbrotlicommon=1.2.0=hc82b238_0 - - libbrotlidec=1.2.0=h431afc6_0 - - libbrotlienc=1.2.0=ha521d6b_0 - - libcblas=3.9.0=35_h2a3cdd5_mkl - - libcurl=8.17.0=h43ecb02_0 - - libdeflate=1.25=h51727cc_0 - - libdlf=0.3.0=pyhd8ed1ab_1 - - libexpat=2.7.3=hac47afa_0 - - libffi=3.5.2=h52bdfb6_0 - - libfreetype=2.14.1=h57928b3_0 - - libfreetype6=2.14.1=hdbac1cb_0 - - libgcc=15.2.0=h1383e82_7 - - libgomp=15.2.0=h1383e82_7 - - libhwloc=2.12.1=default_h64bd3f2_1002 - - libiconv=1.18=hc1393d2_2 - - libjpeg-turbo=3.1.2=hfd05255_0 - - liblapack=3.9.0=35_hf9ab0e9_mkl - - liblzma=5.8.1=h2466b09_2 - - libpng=1.6.50=h7351971_1 - - libspatialindex=2.0.0=h5a68840_0 - - libsqlite=3.51.0=hf5d6505_0 - - libssh2=1.11.1=h9aa295b_0 - - libtiff=4.7.1=h8f73337_1 - - libwebp-base=1.6.0=h4d5522a_0 - - libwinpthread=12.0.0.r4.gg4f2fc60ca=h57928b3_10 - - libxcb=1.17.0=h0e4246c_0 - - libxml2=2.15.1=h5d26750_0 - - libxml2-16=2.15.1=h692994f_0 - - libzlib=1.3.1=h2466b09_2 - - llvm-openmp=21.1.6=h4fa8253_0 - - locket=1.0.0=pyhd8ed1ab_0 - - markupsafe=3.0.3=py311h3f79411_0 - - matplotlib-base=3.8.4=py311h9b31f6e_2 - - mkl=2024.2.2=h57928b3_16 - - msgpack-python=1.1.2=py311h3fd045d_1 - - mumps-seq=5.7.3=hbaa6519_10 - - munkres=1.1.4=pyhd8ed1ab_1 - - numcodecs=0.15.1=py311hcf9f919_0 - - numpy=1.26.4=py311h0b4df5a_0 - - openjpeg=2.5.4=h24db6dd_0 - - openssl=3.6.0=h725018a_0 - - packaging=25.0=pyh29332c3_1 - - pandas=2.3.3=py311h11fd7f3_1 - - partd=1.4.2=pyhd8ed1ab_0 - - pillow=10.3.0=py311h5592be9_1 - - pip=25.3=pyh8b19718_0 - - psutil=7.1.3=py311hf893f09_0 - - pthread-stubs=0.4=h0e40799_1002 - - pycparser=2.22=pyh29332c3_1 - - pydantic=2.12.4=pyh3cfb1c2_0 - - pydantic-core=2.41.5=py311hf51aa87_1 - - pydiso=0.1.2=py311h1c8cef1_1 - - pymatsolver=0.3.1=pyh48887ae_201 - - pyparsing=3.2.5=pyhcf101f3_0 - - pysocks=1.7.1=pyh09c184e_7 - - python=3.11.14=h0159041_2_cpython - - python-dateutil=2.9.0.post0=pyhe01879c_2 - - python-mumps=0.0.3=py311h5bfbc98_0 - - python-tzdata=2025.2=pyhd8ed1ab_0 - - python_abi=3.11=8_cp311 - - pytz=2025.2=pyhd8ed1ab_0 - - pyyaml=6.0.3=py311h3f79411_0 - - rtree=1.2.0=py311h44d53c4_1 - - scikit-learn=1.6.1=py311hdcb8d17_0 - - scipy=1.14.1=py311hf16d85f_2 - - setuptools=80.9.0=pyhff2d567_0 - - six=1.17.0=pyhe01879c_1 - - sortedcontainers=2.4.0=pyhd8ed1ab_1 - - tbb=2021.13.0=hd094cb3_4 - - tblib=3.2.2=pyhcf101f3_0 - - threadpoolctl=3.6.0=pyhecae5ae_0 - - tk=8.6.13=h2c6b04d_3 - - toolz=1.1.0=pyhd8ed1ab_1 - - tornado=6.5.2=py311h3485c13_2 - - tqdm=4.67.1=pyhd8ed1ab_1 - - trimesh=4.1.8=pyhd8ed1ab_0 - - typing-extensions=4.15.0=h396c80c_0 - - typing-inspection=0.4.2=pyhd8ed1ab_0 - - typing_extensions=4.15.0=pyhcf101f3_0 - - tzdata=2025b=h78e105d_0 - - ucrt=10.0.26100.0=h57928b3_0 - - unicodedata2=17.0.0=py311h3485c13_1 - - urllib3=2.5.0=pyhd8ed1ab_0 - - vc=14.3=h2b53caa_32 - - vc14_runtime=14.44.35208=h818238b_32 - - vcomp14=14.44.35208=h818238b_32 - - wheel=0.45.1=pyhd8ed1ab_1 - - win_inet_pton=1.1.0=pyh7428d3b_8 - - wrapt=1.17.3=py311h3485c13_1 - - xorg-libxau=1.0.12=hba3369d_1 - - xorg-libxdmcp=1.1.5=hba3369d_1 - - xyzservices=2025.10.0=pyhd8ed1ab_0 - - yaml=0.2.5=h6a83c73_3 - - zarr=2.14.2=pyhd8ed1ab_0 - - zict=3.0.0=pyhd8ed1ab_1 - - zipp=3.23.0=pyhd8ed1ab_0 - - zstandard=0.25.0=py311hf893f09_1 - - zstd=1.5.7=hbeecb71_2 - - pip: - - geoapps-utils @ git+https://github.com/MiraGeoscience/geoapps-utils.git@15d04763f768cb6f56a3049c9c83a12c88f3060f - - geoh5py @ git+https://github.com/MiraGeoscience/geoh5py.git@6e27ace156c5f5898a77ae96566dea1d90de8cd8 - - grid-apps @ git+https://github.com/MiraGeoscience/grid-apps.git@d6a42611003c184354e1367de41a88783b928166 - - mira-simpeg @ git+https://github.com/MiraGeoscience/simpeg.git@374bd3eb0266841ae256ff8fdbf96cfa6d20f469 - -variables: - KMP_WARNINGS: 0 diff --git a/environments/py-3.12-linux-64-dev.conda.lock.yml b/environments/py-3.12-linux-64-dev.conda.lock.yml deleted file mode 100644 index d55cc3a0..00000000 --- a/environments/py-3.12-linux-64-dev.conda.lock.yml +++ /dev/null @@ -1,297 +0,0 @@ -# Generated by conda-lock. -# platform: linux-64 -# input_hash: 608b87f4b855ba292c2017ba4876079f2137ef68271c41d471fdff5adcbddbbb - -channels: - - conda-forge - - nodefaults -dependencies: - - _openmp_mutex=4.5=6_kmp_llvm - - _python_abi3_support=1.0=hd8ed1ab_2 - - alabaster=0.7.16=pyhd8ed1ab_0 - - annotated-types=0.7.0=pyhd8ed1ab_1 - - anyio=4.11.0=pyhcf101f3_0 - - argon2-cffi=25.1.0=pyhd8ed1ab_0 - - argon2-cffi-bindings=25.1.0=py312h4c3975b_2 - - arrow=1.4.0=pyhcf101f3_0 - - asciitree=0.3.3=py_2 - - astroid=4.0.2=py312h7900ff3_0 - - asttokens=3.0.1=pyhd8ed1ab_0 - - async-lru=2.0.5=pyh29332c3_0 - - attrs=25.4.0=pyh71513ae_0 - - babel=2.17.0=pyhd8ed1ab_0 - - beautifulsoup4=4.14.2=pyha770c72_0 - - bleach=6.3.0=pyhcf101f3_0 - - bleach-with-css=6.3.0=h5f6438b_0 - - bokeh=3.6.3=pyhd8ed1ab_0 - - brotli=1.2.0=h41a2e66_0 - - brotli-bin=1.2.0=hf2c8021_0 - - brotli-python=1.2.0=py312h67db365_0 - - bzip2=1.0.8=hda65f42_8 - - c-ares=1.34.5=hb9d3cd8_0 - - ca-certificates=2025.11.12=hbd8a1cb_0 - - cached-property=1.5.2=hd8ed1ab_1 - - cached_property=1.5.2=pyha770c72_1 - - certifi=2025.11.12=pyhd8ed1ab_0 - - cffi=2.0.0=py312h460c074_1 - - charset-normalizer=3.4.4=pyhd8ed1ab_0 - - click=8.3.1=pyh707e725_0 - - cloudpickle=3.1.2=pyhd8ed1ab_0 - - colorama=0.4.6=pyhd8ed1ab_1 - - comm=0.2.3=pyhe01879c_0 - - contourpy=1.3.3=py312hd9148b4_3 - - coverage=7.12.0=py312h8a5da7c_0 - - cpython=3.12.12=py312hd8ed1ab_1 - - cycler=0.12.1=pyhd8ed1ab_1 - - cytoolz=1.1.0=py312h4c3975b_1 - - dask-core=2025.3.0=pyhd8ed1ab_0 - - debugpy=1.8.17=py312h8285ef7_0 - - decorator=5.2.1=pyhd8ed1ab_0 - - defusedxml=0.7.1=pyhd8ed1ab_0 - - deprecated=1.3.1=pyhd8ed1ab_0 - - dill=0.4.0=pyhd8ed1ab_0 - - discretize=0.11.3=py312hf890105_1 - - distributed=2025.3.0=pyhd8ed1ab_0 - - docutils=0.18.1=py312h7900ff3_1 - - exceptiongroup=1.3.0=pyhd8ed1ab_0 - - executing=2.2.1=pyhd8ed1ab_0 - - fasteners=0.19=pyhd8ed1ab_1 - - fonttools=4.60.1=py312h8a5da7c_0 - - fqdn=1.5.1=pyhd8ed1ab_1 - - freetype=2.14.1=ha770c72_0 - - fsspec=2025.10.0=pyhd8ed1ab_0 - - geoana=0.7.2=py312hf890105_1 - - h11=0.16.0=pyhd8ed1ab_0 - - h2=4.3.0=pyhcf101f3_0 - - h5py=3.15.1=nompi_py312ha4f8f14_100 - - hdf5=1.14.6=nompi_h6e4c0c1_103 - - hpack=4.1.0=pyhd8ed1ab_0 - 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- jupyter_server=2.17.0=pyhcf101f3_0 - - jupyter_server_terminals=0.5.3=pyhd8ed1ab_1 - - jupyterlab=4.5.0=pyhd8ed1ab_0 - - jupyterlab_pygments=0.3.0=pyhd8ed1ab_2 - - jupyterlab_server=2.28.0=pyhcf101f3_0 - - jupyterlab_widgets=1.1.11=pyhd8ed1ab_0 - - jupytext=1.18.1=pyh80e38bb_0 - - keyutils=1.6.3=hb9d3cd8_0 - - kiwisolver=1.4.9=py312h0a2e395_2 - - krb5=1.21.3=h659f571_0 - - lark=1.3.1=pyhd8ed1ab_0 - - lcms2=2.17=h717163a_0 - - ld_impl_linux-64=2.45=h1aa0949_0 - - lerc=4.0.0=h0aef613_1 - - libaec=1.1.4=h3f801dc_0 - - libblas=3.9.0=37_h5875eb1_mkl - - libbrotlicommon=1.2.0=h09219d5_0 - - libbrotlidec=1.2.0=hd53d788_0 - - libbrotlienc=1.2.0=h02bd7ab_0 - - libcblas=3.9.0=37_hfef963f_mkl - - libcurl=8.17.0=h4e3cde8_0 - - libdeflate=1.25=h17f619e_0 - - libdlf=0.3.0=pyhd8ed1ab_1 - - libedit=3.1.20250104=pl5321h7949ede_0 - - libev=4.33=hd590300_2 - - libexpat=2.7.3=hecca717_0 - - libffi=3.5.2=h9ec8514_0 - - libfreetype=2.14.1=ha770c72_0 - - libfreetype6=2.14.1=h73754d4_0 - - libgcc=15.2.0=h767d61c_7 - - libgcc-ng=15.2.0=h69a702a_7 - - libgfortran=15.2.0=h69a702a_7 - - libgfortran5=15.2.0=hcd61629_7 - - libhwloc=2.12.1=default_h7f8ec31_1002 - - libiconv=1.18=h3b78370_2 - - libjpeg-turbo=3.1.2=hb03c661_0 - - liblapack=3.9.0=37_h5e43f62_mkl - - liblzma=5.8.1=hb9d3cd8_2 - - libnghttp2=1.67.0=had1ee68_0 - - libnsl=2.0.1=hb9d3cd8_1 - - libpng=1.6.50=h421ea60_1 - - libscotch=7.0.6=hea33c07_1 - - libsodium=1.0.20=h4ab18f5_0 - - libspatialindex=2.0.0=he02047a_0 - - libsqlite=3.51.0=hee844dc_0 - - libssh2=1.11.1=hcf80075_0 - - libstdcxx=15.2.0=h8f9b012_7 - - libstdcxx-ng=15.2.0=h4852527_7 - - libtiff=4.7.1=h9d88235_1 - - libuuid=2.41.2=he9a06e4_0 - - libuv=1.51.0=hb03c661_1 - - libwebp-base=1.6.0=hd42ef1d_0 - - libxcb=1.17.0=h8a09558_0 - - libxcrypt=4.4.36=hd590300_1 - - libxml2=2.15.1=h26afc86_0 - - libxml2-16=2.15.1=ha9997c6_0 - - libzlib=1.3.1=hb9d3cd8_2 - - llvm-openmp=21.1.6=h4922eb0_0 - - locket=1.0.0=pyhd8ed1ab_0 - - markdown-it-py=4.0.0=pyhd8ed1ab_0 - - markupsafe=3.0.3=py312h8a5da7c_0 - - matplotlib-base=3.8.4=py312h20ab3a6_2 - - matplotlib-inline=0.2.1=pyhd8ed1ab_0 - - mccabe=0.7.0=pyhd8ed1ab_1 - - mdit-py-plugins=0.5.0=pyhd8ed1ab_0 - - mdurl=0.1.2=pyhd8ed1ab_1 - - metis=5.1.0=hd0bcaf9_1007 - - mistune=3.1.4=pyhcf101f3_0 - - mkl=2024.2.2=ha770c72_17 - - msgpack-python=1.1.2=py312hd9148b4_1 - - mumps-include=5.7.3=h82cca05_10 - - mumps-seq=5.7.3=h06cbf8f_10 - - munkres=1.1.4=pyhd8ed1ab_1 - - nbclient=0.10.2=pyhd8ed1ab_0 - - nbconvert=7.16.6=hc388f54_1 - - nbconvert-core=7.16.6=pyhcf101f3_1 - - nbconvert-pandoc=7.16.6=h7d6f222_1 - - nbformat=5.10.4=pyhd8ed1ab_1 - - ncurses=6.5=h2d0b736_3 - - nest-asyncio=1.6.0=pyhd8ed1ab_1 - - nodejs=22.6.0=hc19f0b3_1 - - notebook=7.5.0=pyhcf101f3_0 - - notebook-shim=0.2.4=pyhd8ed1ab_1 - - numcodecs=0.15.1=py312hf9745cd_0 - - numpy=1.26.4=py312heda63a1_0 - - openjpeg=2.5.4=h55fea9a_0 - - openssl=3.6.0=h26f9b46_0 - - overrides=7.7.0=pyhd8ed1ab_1 - - packaging=25.0=pyh29332c3_1 - - pandas=2.3.3=py312hf79963d_1 - - pandoc=3.8.2.1=ha770c72_0 - - pandocfilters=1.5.0=pyhd8ed1ab_0 - - parso=0.8.5=pyhcf101f3_0 - - partd=1.4.2=pyhd8ed1ab_0 - - pexpect=4.9.0=pyhd8ed1ab_1 - - pillow=10.3.0=py312h287a98d_1 - - pip=25.3=pyh8b19718_0 - - platformdirs=4.5.0=pyhcf101f3_0 - - pluggy=1.6.0=pyhd8ed1ab_0 - - prometheus_client=0.23.1=pyhd8ed1ab_0 - - prompt-toolkit=3.0.52=pyha770c72_0 - - psutil=7.1.3=py312h5253ce2_0 - - pthread-stubs=0.4=hb9d3cd8_1002 - - ptyprocess=0.7.0=pyhd8ed1ab_1 - - pure_eval=0.2.3=pyhd8ed1ab_1 - - pycparser=2.22=pyh29332c3_1 - - pydantic=2.12.4=pyh3cfb1c2_0 - - pydantic-core=2.41.5=py312h868fb18_1 - - pydiso=0.1.2=py312h686354e_1 - - pygments=2.19.2=pyhd8ed1ab_0 - - pylint=4.0.3=pyhcf101f3_0 - - pymatsolver=0.3.1=pyh48887ae_201 - - pyparsing=3.2.5=pyhcf101f3_0 - - pysocks=1.7.1=pyha55dd90_7 - - pytest=9.0.1=pyhcf101f3_0 - - pytest-cov=7.0.0=pyhcf101f3_1 - - python=3.12.12=hd63d673_1_cpython - - python-dateutil=2.9.0.post0=pyhe01879c_2 - - python-fastjsonschema=2.21.2=pyhe01879c_0 - - python-gil=3.12.12=hd8ed1ab_1 - - python-json-logger=2.0.7=pyhd8ed1ab_0 - - python-mumps=0.0.3=py312h6ad3ee3_0 - - python-tzdata=2025.2=pyhd8ed1ab_0 - - python_abi=3.12=8_cp312 - - pytz=2025.2=pyhd8ed1ab_0 - - pyyaml=6.0.3=py312h8a5da7c_0 - - pyzmq=27.1.0=py312hfb55c3c_0 - - readline=8.2=h8c095d6_2 - - readthedocs-sphinx-ext=2.2.5=pyhd8ed1ab_1 - - referencing=0.37.0=pyhcf101f3_0 - - requests=2.32.5=pyhd8ed1ab_0 - - rfc3339-validator=0.1.4=pyhd8ed1ab_1 - - rfc3986-validator=0.1.1=pyh9f0ad1d_0 - - rfc3987-syntax=1.1.0=pyhe01879c_1 - - rpds-py=0.29.0=py312h868fb18_0 - - rtree=1.2.0=py312h3ed4c40_1 - - scikit-learn=1.6.1=py312h7a48858_0 - - scipy=1.14.1=py312h62794b6_2 - - send2trash=1.8.3=pyh0d859eb_1 - - setuptools=80.9.0=pyhff2d567_0 - - six=1.17.0=pyhe01879c_1 - - sniffio=1.3.1=pyhd8ed1ab_2 - - snowballstemmer=3.0.1=pyhd8ed1ab_0 - - sortedcontainers=2.4.0=pyhd8ed1ab_1 - - soupsieve=2.8=pyhd8ed1ab_0 - - sphinx=5.3.0=pyhd8ed1ab_0 - - sphinxcontrib-applehelp=2.0.0=pyhd8ed1ab_1 - - sphinxcontrib-devhelp=2.0.0=pyhd8ed1ab_1 - - sphinxcontrib-htmlhelp=2.1.0=pyhd8ed1ab_1 - - sphinxcontrib-jsmath=1.0.1=pyhd8ed1ab_1 - - sphinxcontrib-qthelp=2.0.0=pyhd8ed1ab_1 - - sphinxcontrib-serializinghtml=1.1.10=pyhd8ed1ab_1 - - stack_data=0.6.3=pyhd8ed1ab_1 - - tbb=2021.13.0=h8d10470_4 - - tblib=3.2.2=pyhcf101f3_0 - - terminado=0.18.1=pyh0d859eb_0 - - threadpoolctl=3.6.0=pyhecae5ae_0 - - tinycss2=1.5.0=pyhcf101f3_0 - - tk=8.6.13=noxft_ha0e22de_103 - - tomli=2.3.0=pyhcf101f3_0 - - tomlkit=0.13.3=pyha770c72_0 - - toolz=1.1.0=pyhd8ed1ab_1 - - tornado=6.5.2=py312h4c3975b_2 - - tqdm=4.67.1=pyhd8ed1ab_1 - - traitlets=5.14.3=pyhd8ed1ab_1 - - trimesh=4.1.8=pyhd8ed1ab_0 - - typing-extensions=4.15.0=h396c80c_0 - - typing-inspection=0.4.2=pyhd8ed1ab_0 - - typing_extensions=4.15.0=pyhcf101f3_0 - - typing_utils=0.1.0=pyhd8ed1ab_1 - - tzdata=2025b=h78e105d_0 - - unicodedata2=17.0.0=py312h4c3975b_1 - - uri-template=1.3.0=pyhd8ed1ab_1 - - urllib3=2.5.0=pyhd8ed1ab_0 - - wcwidth=0.2.14=pyhd8ed1ab_0 - - webcolors=25.10.0=pyhd8ed1ab_0 - - webencodings=0.5.1=pyhd8ed1ab_3 - - websocket-client=1.9.0=pyhd8ed1ab_0 - - wheel=0.45.1=pyhd8ed1ab_1 - - widgetsnbextension=3.6.10=pyhd8ed1ab_0 - - wrapt=1.17.3=py312h4c3975b_1 - - xorg-libxau=1.0.12=hb03c661_1 - - xorg-libxdmcp=1.1.5=hb03c661_1 - - xyzservices=2025.10.0=pyhd8ed1ab_0 - - yaml=0.2.5=h280c20c_3 - - zarr=2.14.2=pyhd8ed1ab_0 - - zeromq=4.3.5=h387f397_9 - - zict=3.0.0=pyhd8ed1ab_1 - - zipp=3.23.0=pyhd8ed1ab_0 - - zlib=1.3.1=hb9d3cd8_2 - - zstandard=0.25.0=py312h5253ce2_1 - - zstd=1.5.7=hb8e6e7a_2 - - pip: - - geoapps-utils @ git+https://github.com/MiraGeoscience/geoapps-utils.git@15d04763f768cb6f56a3049c9c83a12c88f3060f - - geoh5py @ git+https://github.com/MiraGeoscience/geoh5py.git@6e27ace156c5f5898a77ae96566dea1d90de8cd8 - - grid-apps @ git+https://github.com/MiraGeoscience/grid-apps.git@d6a42611003c184354e1367de41a88783b928166 - - mira-simpeg @ git+https://github.com/MiraGeoscience/simpeg.git@374bd3eb0266841ae256ff8fdbf96cfa6d20f469 - -variables: - KMP_WARNINGS: 0 diff --git a/environments/py-3.12-linux-64.conda.lock.yml b/environments/py-3.12-linux-64.conda.lock.yml deleted file mode 100644 index 1141ef63..00000000 --- a/environments/py-3.12-linux-64.conda.lock.yml +++ /dev/null @@ -1,169 +0,0 @@ -# Generated by conda-lock. -# platform: linux-64 -# input_hash: 608b87f4b855ba292c2017ba4876079f2137ef68271c41d471fdff5adcbddbbb - -channels: - - conda-forge - - nodefaults -dependencies: - - _openmp_mutex=4.5=6_kmp_llvm - - annotated-types=0.7.0=pyhd8ed1ab_1 - - asciitree=0.3.3=py_2 - - bokeh=3.6.3=pyhd8ed1ab_0 - - brotli=1.2.0=h41a2e66_0 - - brotli-bin=1.2.0=hf2c8021_0 - - brotli-python=1.2.0=py312h67db365_0 - - bzip2=1.0.8=hda65f42_8 - - c-ares=1.34.5=hb9d3cd8_0 - - ca-certificates=2025.11.12=hbd8a1cb_0 - - cached-property=1.5.2=hd8ed1ab_1 - - cached_property=1.5.2=pyha770c72_1 - - certifi=2025.11.12=pyhd8ed1ab_0 - - cffi=2.0.0=py312h460c074_1 - - click=8.3.1=pyh707e725_0 - - cloudpickle=3.1.2=pyhd8ed1ab_0 - - colorama=0.4.6=pyhd8ed1ab_1 - - contourpy=1.3.3=py312hd9148b4_3 - - cycler=0.12.1=pyhd8ed1ab_1 - - cytoolz=1.1.0=py312h4c3975b_1 - - dask-core=2025.3.0=pyhd8ed1ab_0 - - deprecated=1.3.1=pyhd8ed1ab_0 - - discretize=0.11.3=py312hf890105_1 - - distributed=2025.3.0=pyhd8ed1ab_0 - - fasteners=0.19=pyhd8ed1ab_1 - - fonttools=4.60.1=py312h8a5da7c_0 - - freetype=2.14.1=ha770c72_0 - - fsspec=2025.10.0=pyhd8ed1ab_0 - - geoana=0.7.2=py312hf890105_1 - - h2=4.3.0=pyhcf101f3_0 - - h5py=3.15.1=nompi_py312ha4f8f14_100 - - hdf5=1.14.6=nompi_h6e4c0c1_103 - - hpack=4.1.0=pyhd8ed1ab_0 - - hyperframe=6.1.0=pyhd8ed1ab_0 - - icu=75.1=he02047a_0 - - importlib-metadata=8.7.0=pyhe01879c_1 - - jinja2=3.1.6=pyhd8ed1ab_0 - - joblib=1.5.2=pyhd8ed1ab_0 - - keyutils=1.6.3=hb9d3cd8_0 - - kiwisolver=1.4.9=py312h0a2e395_2 - - krb5=1.21.3=h659f571_0 - - lcms2=2.17=h717163a_0 - - ld_impl_linux-64=2.45=h1aa0949_0 - - lerc=4.0.0=h0aef613_1 - - libaec=1.1.4=h3f801dc_0 - - libblas=3.9.0=37_h5875eb1_mkl - - libbrotlicommon=1.2.0=h09219d5_0 - - libbrotlidec=1.2.0=hd53d788_0 - - libbrotlienc=1.2.0=h02bd7ab_0 - - libcblas=3.9.0=37_hfef963f_mkl - - libcurl=8.17.0=h4e3cde8_0 - - libdeflate=1.25=h17f619e_0 - - libdlf=0.3.0=pyhd8ed1ab_1 - - libedit=3.1.20250104=pl5321h7949ede_0 - - libev=4.33=hd590300_2 - - libexpat=2.7.3=hecca717_0 - - libffi=3.5.2=h9ec8514_0 - - libfreetype=2.14.1=ha770c72_0 - - libfreetype6=2.14.1=h73754d4_0 - - libgcc=15.2.0=h767d61c_7 - - libgcc-ng=15.2.0=h69a702a_7 - - libgfortran=15.2.0=h69a702a_7 - - libgfortran5=15.2.0=hcd61629_7 - - libhwloc=2.12.1=default_h7f8ec31_1002 - - libiconv=1.18=h3b78370_2 - - libjpeg-turbo=3.1.2=hb03c661_0 - - liblapack=3.9.0=37_h5e43f62_mkl - - liblzma=5.8.1=hb9d3cd8_2 - - libnghttp2=1.67.0=had1ee68_0 - - libnsl=2.0.1=hb9d3cd8_1 - - libpng=1.6.50=h421ea60_1 - - libscotch=7.0.6=hea33c07_1 - - libspatialindex=2.0.0=he02047a_0 - - libsqlite=3.51.0=hee844dc_0 - - libssh2=1.11.1=hcf80075_0 - - libstdcxx=15.2.0=h8f9b012_7 - - libstdcxx-ng=15.2.0=h4852527_7 - - libtiff=4.7.1=h9d88235_1 - - libuuid=2.41.2=he9a06e4_0 - - libwebp-base=1.6.0=hd42ef1d_0 - - libxcb=1.17.0=h8a09558_0 - - libxcrypt=4.4.36=hd590300_1 - - libxml2=2.15.1=h26afc86_0 - - libxml2-16=2.15.1=ha9997c6_0 - - libzlib=1.3.1=hb9d3cd8_2 - - llvm-openmp=21.1.6=h4922eb0_0 - - locket=1.0.0=pyhd8ed1ab_0 - - markupsafe=3.0.3=py312h8a5da7c_0 - - matplotlib-base=3.8.4=py312h20ab3a6_2 - - metis=5.1.0=hd0bcaf9_1007 - - mkl=2024.2.2=ha770c72_17 - - msgpack-python=1.1.2=py312hd9148b4_1 - - mumps-include=5.7.3=h82cca05_10 - - mumps-seq=5.7.3=h06cbf8f_10 - - munkres=1.1.4=pyhd8ed1ab_1 - - ncurses=6.5=h2d0b736_3 - - numcodecs=0.15.1=py312hf9745cd_0 - - numpy=1.26.4=py312heda63a1_0 - - openjpeg=2.5.4=h55fea9a_0 - - openssl=3.6.0=h26f9b46_0 - - packaging=25.0=pyh29332c3_1 - - pandas=2.3.3=py312hf79963d_1 - - partd=1.4.2=pyhd8ed1ab_0 - - pillow=10.3.0=py312h287a98d_1 - - pip=25.3=pyh8b19718_0 - - psutil=7.1.3=py312h5253ce2_0 - - pthread-stubs=0.4=hb9d3cd8_1002 - - pycparser=2.22=pyh29332c3_1 - - pydantic=2.12.4=pyh3cfb1c2_0 - - pydantic-core=2.41.5=py312h868fb18_1 - - pydiso=0.1.2=py312h686354e_1 - - pymatsolver=0.3.1=pyh48887ae_201 - - pyparsing=3.2.5=pyhcf101f3_0 - - pysocks=1.7.1=pyha55dd90_7 - - python=3.12.12=hd63d673_1_cpython - - python-dateutil=2.9.0.post0=pyhe01879c_2 - - python-mumps=0.0.3=py312h6ad3ee3_0 - - python-tzdata=2025.2=pyhd8ed1ab_0 - - python_abi=3.12=8_cp312 - - pytz=2025.2=pyhd8ed1ab_0 - - pyyaml=6.0.3=py312h8a5da7c_0 - - readline=8.2=h8c095d6_2 - - rtree=1.2.0=py312h3ed4c40_1 - - scikit-learn=1.6.1=py312h7a48858_0 - - scipy=1.14.1=py312h62794b6_2 - - setuptools=80.9.0=pyhff2d567_0 - - six=1.17.0=pyhe01879c_1 - - sortedcontainers=2.4.0=pyhd8ed1ab_1 - - tbb=2021.13.0=h8d10470_4 - - tblib=3.2.2=pyhcf101f3_0 - - threadpoolctl=3.6.0=pyhecae5ae_0 - - tk=8.6.13=noxft_ha0e22de_103 - - toolz=1.1.0=pyhd8ed1ab_1 - - tornado=6.5.2=py312h4c3975b_2 - - tqdm=4.67.1=pyhd8ed1ab_1 - - trimesh=4.1.8=pyhd8ed1ab_0 - - typing-extensions=4.15.0=h396c80c_0 - - typing-inspection=0.4.2=pyhd8ed1ab_0 - - typing_extensions=4.15.0=pyhcf101f3_0 - - tzdata=2025b=h78e105d_0 - - unicodedata2=17.0.0=py312h4c3975b_1 - - urllib3=2.5.0=pyhd8ed1ab_0 - - wheel=0.45.1=pyhd8ed1ab_1 - - wrapt=1.17.3=py312h4c3975b_1 - - xorg-libxau=1.0.12=hb03c661_1 - - xorg-libxdmcp=1.1.5=hb03c661_1 - - xyzservices=2025.10.0=pyhd8ed1ab_0 - - yaml=0.2.5=h280c20c_3 - - zarr=2.14.2=pyhd8ed1ab_0 - - zict=3.0.0=pyhd8ed1ab_1 - - zipp=3.23.0=pyhd8ed1ab_0 - - zstandard=0.25.0=py312h5253ce2_1 - - zstd=1.5.7=hb8e6e7a_2 - - pip: - - geoapps-utils @ git+https://github.com/MiraGeoscience/geoapps-utils.git@15d04763f768cb6f56a3049c9c83a12c88f3060f - - geoh5py @ git+https://github.com/MiraGeoscience/geoh5py.git@6e27ace156c5f5898a77ae96566dea1d90de8cd8 - - grid-apps @ git+https://github.com/MiraGeoscience/grid-apps.git@d6a42611003c184354e1367de41a88783b928166 - - mira-simpeg @ git+https://github.com/MiraGeoscience/simpeg.git@374bd3eb0266841ae256ff8fdbf96cfa6d20f469 - -variables: - KMP_WARNINGS: 0 diff --git a/environments/py-3.12-win-64-dev.conda.lock.yml b/environments/py-3.12-win-64-dev.conda.lock.yml deleted file mode 100644 index fdd09548..00000000 --- a/environments/py-3.12-win-64-dev.conda.lock.yml +++ /dev/null @@ -1,283 +0,0 @@ -# Generated by conda-lock. -# platform: win-64 -# input_hash: f4227737b8187e2e8802ca32ed30b32d0ca704c31a51c38346f3b858f1284b8f - -channels: - - conda-forge - - nodefaults -dependencies: - - _openmp_mutex=4.5=2_gnu - - _python_abi3_support=1.0=hd8ed1ab_2 - - alabaster=0.7.16=pyhd8ed1ab_0 - - annotated-types=0.7.0=pyhd8ed1ab_1 - - anyio=4.11.0=pyhcf101f3_0 - - argon2-cffi=25.1.0=pyhd8ed1ab_0 - - argon2-cffi-bindings=25.1.0=py312he06e257_2 - - arrow=1.4.0=pyhcf101f3_0 - - asciitree=0.3.3=py_2 - - astroid=4.0.2=py312h2e8e312_0 - - asttokens=3.0.1=pyhd8ed1ab_0 - - async-lru=2.0.5=pyh29332c3_0 - - attrs=25.4.0=pyh71513ae_0 - - babel=2.17.0=pyhd8ed1ab_0 - - beautifulsoup4=4.14.2=pyha770c72_0 - - bleach=6.3.0=pyhcf101f3_0 - - bleach-with-css=6.3.0=h5f6438b_0 - - bokeh=3.6.3=pyhd8ed1ab_0 - - brotli=1.2.0=h17ff524_0 - - brotli-bin=1.2.0=h6910e44_0 - - brotli-python=1.2.0=py312h9d5906e_0 - - bzip2=1.0.8=h0ad9c76_8 - - ca-certificates=2025.11.12=h4c7d964_0 - - cached-property=1.5.2=hd8ed1ab_1 - - cached_property=1.5.2=pyha770c72_1 - - certifi=2025.11.12=pyhd8ed1ab_0 - - cffi=2.0.0=py312he06e257_1 - - charset-normalizer=3.4.4=pyhd8ed1ab_0 - - click=8.3.1=pyh7428d3b_0 - - cloudpickle=3.1.2=pyhd8ed1ab_0 - - colorama=0.4.6=pyhd8ed1ab_1 - - comm=0.2.3=pyhe01879c_0 - - contourpy=1.3.3=py312hf90b1b7_3 - - coverage=7.12.0=py312h05f76fc_0 - - cpython=3.12.12=py312hd8ed1ab_1 - - cycler=0.12.1=pyhd8ed1ab_1 - - cytoolz=1.1.0=py312he06e257_1 - - dask-core=2025.3.0=pyhd8ed1ab_0 - - debugpy=1.8.17=py312ha1a9051_0 - - decorator=5.2.1=pyhd8ed1ab_0 - - defusedxml=0.7.1=pyhd8ed1ab_0 - - deprecated=1.3.1=pyhd8ed1ab_0 - - dill=0.4.0=pyhd8ed1ab_0 - - discretize=0.11.3=py312h9b46583_1 - - distributed=2025.3.0=pyhd8ed1ab_0 - - docutils=0.18.1=py312h2e8e312_1 - - exceptiongroup=1.3.0=pyhd8ed1ab_0 - - executing=2.2.1=pyhd8ed1ab_0 - - fasteners=0.19=pyhd8ed1ab_1 - - fonttools=4.60.1=py312h05f76fc_0 - - fqdn=1.5.1=pyhd8ed1ab_1 - - freetype=2.14.1=h57928b3_0 - - fsspec=2025.10.0=pyhd8ed1ab_0 - - geoana=0.7.2=py312h9b46583_1 - - h11=0.16.0=pyhd8ed1ab_0 - - h2=4.3.0=pyhcf101f3_0 - - h5py=3.15.1=nompi_py312h03cd2ba_100 - - hdf5=1.14.6=nompi_he30205f_103 - - hpack=4.1.0=pyhd8ed1ab_0 - - httpcore=1.0.9=pyh29332c3_0 - - httpx=0.28.1=pyhd8ed1ab_0 - - hyperframe=6.1.0=pyhd8ed1ab_0 - - idna=3.11=pyhd8ed1ab_0 - - imagesize=1.4.1=pyhd8ed1ab_0 - - importlib-metadata=8.7.0=pyhe01879c_1 - - importlib_resources=6.5.2=pyhd8ed1ab_0 - - iniconfig=2.3.0=pyhd8ed1ab_0 - - ipykernel=7.1.0=pyh6dadd2b_0 - - ipython=9.7.0=pyhe2676ad_0 - - ipython_genutils=0.2.0=pyhd8ed1ab_2 - - ipython_pygments_lexers=1.1.1=pyhd8ed1ab_0 - - ipywidgets=7.8.5=pyhd8ed1ab_0 - - isoduration=20.11.0=pyhd8ed1ab_1 - - isort=7.0.0=pyhd8ed1ab_0 - - jedi=0.19.2=pyhd8ed1ab_1 - - jinja2=3.1.6=pyhd8ed1ab_0 - - joblib=1.5.2=pyhd8ed1ab_0 - - json5=0.12.1=pyhd8ed1ab_0 - - jsonpointer=3.0.0=py312h2e8e312_2 - - jsonschema=4.25.1=pyhe01879c_0 - - jsonschema-specifications=2025.9.1=pyhcf101f3_0 - - jsonschema-with-format-nongpl=4.25.1=he01879c_0 - - jupyter-book=2.0.2=pyhcf101f3_0 - - jupyter-lsp=2.3.0=pyhcf101f3_0 - - jupyter_client=8.6.3=pyhd8ed1ab_1 - - jupyter_core=5.9.1=pyh6dadd2b_0 - - jupyter_events=0.12.0=pyh29332c3_0 - - jupyter_server=2.17.0=pyhcf101f3_0 - - jupyter_server_terminals=0.5.3=pyhd8ed1ab_1 - - jupyterlab=4.5.0=pyhd8ed1ab_0 - - jupyterlab_pygments=0.3.0=pyhd8ed1ab_2 - - jupyterlab_server=2.28.0=pyhcf101f3_0 - - jupyterlab_widgets=1.1.11=pyhd8ed1ab_0 - - jupytext=1.18.1=pyh80e38bb_0 - - kiwisolver=1.4.9=py312h78d62e6_2 - - krb5=1.21.3=hdf4eb48_0 - - lark=1.3.1=pyhd8ed1ab_0 - - lcms2=2.17=hbcf6048_0 - - lerc=4.0.0=h6470a55_1 - - libaec=1.1.4=h20038f6_0 - - libblas=3.9.0=35_h5709861_mkl - - libbrotlicommon=1.2.0=hc82b238_0 - - libbrotlidec=1.2.0=h431afc6_0 - - libbrotlienc=1.2.0=ha521d6b_0 - - libcblas=3.9.0=35_h2a3cdd5_mkl - - libcurl=8.17.0=h43ecb02_0 - - libdeflate=1.25=h51727cc_0 - - libdlf=0.3.0=pyhd8ed1ab_1 - - libexpat=2.7.3=hac47afa_0 - - libffi=3.5.2=h52bdfb6_0 - - libfreetype=2.14.1=h57928b3_0 - - libfreetype6=2.14.1=hdbac1cb_0 - - libgcc=15.2.0=h1383e82_7 - - libgomp=15.2.0=h1383e82_7 - - libhwloc=2.12.1=default_h64bd3f2_1002 - - libiconv=1.18=hc1393d2_2 - - libjpeg-turbo=3.1.2=hfd05255_0 - - liblapack=3.9.0=35_hf9ab0e9_mkl - - liblzma=5.8.1=h2466b09_2 - - libpng=1.6.50=h7351971_1 - - libsodium=1.0.20=hc70643c_0 - - libspatialindex=2.0.0=h5a68840_0 - - libsqlite=3.51.0=hf5d6505_0 - - libssh2=1.11.1=h9aa295b_0 - - libtiff=4.7.1=h8f73337_1 - - libwebp-base=1.6.0=h4d5522a_0 - - libwinpthread=12.0.0.r4.gg4f2fc60ca=h57928b3_10 - - libxcb=1.17.0=h0e4246c_0 - - libxml2=2.15.1=h5d26750_0 - - libxml2-16=2.15.1=h692994f_0 - - libzlib=1.3.1=h2466b09_2 - - llvm-openmp=21.1.6=h4fa8253_0 - - locket=1.0.0=pyhd8ed1ab_0 - - markdown-it-py=4.0.0=pyhd8ed1ab_0 - - markupsafe=3.0.3=py312h05f76fc_0 - - matplotlib-base=3.8.4=py312hfee7060_2 - - matplotlib-inline=0.2.1=pyhd8ed1ab_0 - - mccabe=0.7.0=pyhd8ed1ab_1 - - mdit-py-plugins=0.5.0=pyhd8ed1ab_0 - - mdurl=0.1.2=pyhd8ed1ab_1 - - mistune=3.1.4=pyhcf101f3_0 - - mkl=2024.2.2=h57928b3_16 - - msgpack-python=1.1.2=py312hf90b1b7_1 - - mumps-seq=5.7.3=hbaa6519_10 - - munkres=1.1.4=pyhd8ed1ab_1 - - nbclient=0.10.2=pyhd8ed1ab_0 - - nbconvert=7.16.6=hc388f54_1 - - nbconvert-core=7.16.6=pyhcf101f3_1 - - nbconvert-pandoc=7.16.6=h7d6f222_1 - - nbformat=5.10.4=pyhd8ed1ab_1 - - nest-asyncio=1.6.0=pyhd8ed1ab_1 - - nodejs=24.9.0=he453025_0 - - notebook=7.5.0=pyhcf101f3_0 - - notebook-shim=0.2.4=pyhd8ed1ab_1 - - numcodecs=0.15.1=py312h72972c8_0 - - numpy=1.26.4=py312h8753938_0 - - openjpeg=2.5.4=h24db6dd_0 - - openssl=3.6.0=h725018a_0 - - overrides=7.7.0=pyhd8ed1ab_1 - - packaging=25.0=pyh29332c3_1 - - pandas=2.3.3=py312hc128f0a_1 - - pandoc=3.8.2.1=h57928b3_0 - - pandocfilters=1.5.0=pyhd8ed1ab_0 - - parso=0.8.5=pyhcf101f3_0 - - partd=1.4.2=pyhd8ed1ab_0 - - pillow=10.3.0=py312h381445a_1 - - pip=25.3=pyh8b19718_0 - - platformdirs=4.5.0=pyhcf101f3_0 - - pluggy=1.6.0=pyhd8ed1ab_0 - - prometheus_client=0.23.1=pyhd8ed1ab_0 - - prompt-toolkit=3.0.52=pyha770c72_0 - - psutil=7.1.3=py312he5662c2_0 - - pthread-stubs=0.4=h0e40799_1002 - - pure_eval=0.2.3=pyhd8ed1ab_1 - - pycparser=2.22=pyh29332c3_1 - - pydantic=2.12.4=pyh3cfb1c2_0 - - pydantic-core=2.41.5=py312hdabe01f_1 - - pydiso=0.1.2=py312h3fe0e52_1 - - pygments=2.19.2=pyhd8ed1ab_0 - - pylint=4.0.3=pyhcf101f3_0 - - pymatsolver=0.3.1=pyh48887ae_201 - - pyparsing=3.2.5=pyhcf101f3_0 - - pysocks=1.7.1=pyh09c184e_7 - - pytest=9.0.1=pyhcf101f3_0 - - pytest-cov=7.0.0=pyhcf101f3_1 - - python=3.12.12=h0159041_1_cpython - - python-dateutil=2.9.0.post0=pyhe01879c_2 - - python-fastjsonschema=2.21.2=pyhe01879c_0 - - python-gil=3.12.12=hd8ed1ab_1 - - python-json-logger=2.0.7=pyhd8ed1ab_0 - - python-mumps=0.0.3=py312h8095395_0 - - python-tzdata=2025.2=pyhd8ed1ab_0 - - python_abi=3.12=8_cp312 - - pytz=2025.2=pyhd8ed1ab_0 - - pywin32=311=py312h829343e_1 - - pywinpty=2.0.15=py312h275cf98_1 - - pyyaml=6.0.3=py312h05f76fc_0 - - pyzmq=27.1.0=py312hbb5da91_0 - - readthedocs-sphinx-ext=2.2.5=pyhd8ed1ab_1 - - referencing=0.37.0=pyhcf101f3_0 - - requests=2.32.5=pyhd8ed1ab_0 - - rfc3339-validator=0.1.4=pyhd8ed1ab_1 - - rfc3986-validator=0.1.1=pyh9f0ad1d_0 - - rfc3987-syntax=1.1.0=pyhe01879c_1 - - rpds-py=0.29.0=py312hdabe01f_0 - - rtree=1.2.0=py312h50e5f8f_1 - - scikit-learn=1.6.1=py312h816cc57_0 - - scipy=1.14.1=py312h337df96_2 - - send2trash=1.8.3=pyh5737063_1 - - setuptools=80.9.0=pyhff2d567_0 - - six=1.17.0=pyhe01879c_1 - - sniffio=1.3.1=pyhd8ed1ab_2 - - snowballstemmer=3.0.1=pyhd8ed1ab_0 - - sortedcontainers=2.4.0=pyhd8ed1ab_1 - - soupsieve=2.8=pyhd8ed1ab_0 - - sphinx=5.3.0=pyhd8ed1ab_0 - - sphinxcontrib-applehelp=2.0.0=pyhd8ed1ab_1 - - sphinxcontrib-devhelp=2.0.0=pyhd8ed1ab_1 - - sphinxcontrib-htmlhelp=2.1.0=pyhd8ed1ab_1 - - sphinxcontrib-jsmath=1.0.1=pyhd8ed1ab_1 - - sphinxcontrib-qthelp=2.0.0=pyhd8ed1ab_1 - - sphinxcontrib-serializinghtml=1.1.10=pyhd8ed1ab_1 - - stack_data=0.6.3=pyhd8ed1ab_1 - - tbb=2021.13.0=hd094cb3_4 - - tblib=3.2.2=pyhcf101f3_0 - - terminado=0.18.1=pyh5737063_0 - - threadpoolctl=3.6.0=pyhecae5ae_0 - - tinycss2=1.5.0=pyhcf101f3_0 - - tk=8.6.13=h2c6b04d_3 - - tomli=2.3.0=pyhcf101f3_0 - - tomlkit=0.13.3=pyha770c72_0 - - toolz=1.1.0=pyhd8ed1ab_1 - - tornado=6.5.2=py312he06e257_2 - - tqdm=4.67.1=pyhd8ed1ab_1 - - traitlets=5.14.3=pyhd8ed1ab_1 - - trimesh=4.1.8=pyhd8ed1ab_0 - - typing-extensions=4.15.0=h396c80c_0 - - typing-inspection=0.4.2=pyhd8ed1ab_0 - - typing_extensions=4.15.0=pyhcf101f3_0 - - typing_utils=0.1.0=pyhd8ed1ab_1 - - tzdata=2025b=h78e105d_0 - - ucrt=10.0.26100.0=h57928b3_0 - - unicodedata2=17.0.0=py312he06e257_1 - - uri-template=1.3.0=pyhd8ed1ab_1 - - urllib3=2.5.0=pyhd8ed1ab_0 - - vc=14.3=h2b53caa_32 - - vc14_runtime=14.44.35208=h818238b_32 - - vcomp14=14.44.35208=h818238b_32 - - wcwidth=0.2.14=pyhd8ed1ab_0 - - webcolors=25.10.0=pyhd8ed1ab_0 - - webencodings=0.5.1=pyhd8ed1ab_3 - - websocket-client=1.9.0=pyhd8ed1ab_0 - - wheel=0.45.1=pyhd8ed1ab_1 - - widgetsnbextension=3.6.10=pyhd8ed1ab_0 - - win_inet_pton=1.1.0=pyh7428d3b_8 - - winpty=0.4.3=4 - - wrapt=1.17.3=py312he06e257_1 - - xorg-libxau=1.0.12=hba3369d_1 - - xorg-libxdmcp=1.1.5=hba3369d_1 - - xyzservices=2025.10.0=pyhd8ed1ab_0 - - yaml=0.2.5=h6a83c73_3 - - zarr=2.14.2=pyhd8ed1ab_0 - - zeromq=4.3.5=h5bddc39_9 - - zict=3.0.0=pyhd8ed1ab_1 - - zipp=3.23.0=pyhd8ed1ab_0 - - zstandard=0.25.0=py312he5662c2_1 - - zstd=1.5.7=hbeecb71_2 - - pip: - - geoapps-utils @ git+https://github.com/MiraGeoscience/geoapps-utils.git@15d04763f768cb6f56a3049c9c83a12c88f3060f - - geoh5py @ git+https://github.com/MiraGeoscience/geoh5py.git@6e27ace156c5f5898a77ae96566dea1d90de8cd8 - - grid-apps @ git+https://github.com/MiraGeoscience/grid-apps.git@d6a42611003c184354e1367de41a88783b928166 - - mira-simpeg @ git+https://github.com/MiraGeoscience/simpeg.git@374bd3eb0266841ae256ff8fdbf96cfa6d20f469 - -variables: - KMP_WARNINGS: 0 diff --git a/environments/py-3.12-win-64.conda.lock.yml b/environments/py-3.12-win-64.conda.lock.yml deleted file mode 100644 index c341ade2..00000000 --- a/environments/py-3.12-win-64.conda.lock.yml +++ /dev/null @@ -1,156 +0,0 @@ -# Generated by conda-lock. -# platform: win-64 -# input_hash: f4227737b8187e2e8802ca32ed30b32d0ca704c31a51c38346f3b858f1284b8f - -channels: - - conda-forge - - nodefaults -dependencies: - - _openmp_mutex=4.5=2_gnu - - annotated-types=0.7.0=pyhd8ed1ab_1 - - asciitree=0.3.3=py_2 - - bokeh=3.6.3=pyhd8ed1ab_0 - - brotli=1.2.0=h17ff524_0 - - brotli-bin=1.2.0=h6910e44_0 - - brotli-python=1.2.0=py312h9d5906e_0 - - bzip2=1.0.8=h0ad9c76_8 - - ca-certificates=2025.11.12=h4c7d964_0 - - cached-property=1.5.2=hd8ed1ab_1 - - cached_property=1.5.2=pyha770c72_1 - - certifi=2025.11.12=pyhd8ed1ab_0 - - cffi=2.0.0=py312he06e257_1 - - click=8.3.1=pyh7428d3b_0 - - cloudpickle=3.1.2=pyhd8ed1ab_0 - - colorama=0.4.6=pyhd8ed1ab_1 - - contourpy=1.3.3=py312hf90b1b7_3 - - cycler=0.12.1=pyhd8ed1ab_1 - - cytoolz=1.1.0=py312he06e257_1 - - dask-core=2025.3.0=pyhd8ed1ab_0 - - deprecated=1.3.1=pyhd8ed1ab_0 - - discretize=0.11.3=py312h9b46583_1 - - distributed=2025.3.0=pyhd8ed1ab_0 - - fasteners=0.19=pyhd8ed1ab_1 - - fonttools=4.60.1=py312h05f76fc_0 - - freetype=2.14.1=h57928b3_0 - - fsspec=2025.10.0=pyhd8ed1ab_0 - - geoana=0.7.2=py312h9b46583_1 - - h2=4.3.0=pyhcf101f3_0 - - h5py=3.15.1=nompi_py312h03cd2ba_100 - - hdf5=1.14.6=nompi_he30205f_103 - - hpack=4.1.0=pyhd8ed1ab_0 - - hyperframe=6.1.0=pyhd8ed1ab_0 - - importlib-metadata=8.7.0=pyhe01879c_1 - - jinja2=3.1.6=pyhd8ed1ab_0 - - joblib=1.5.2=pyhd8ed1ab_0 - - kiwisolver=1.4.9=py312h78d62e6_2 - - krb5=1.21.3=hdf4eb48_0 - - lcms2=2.17=hbcf6048_0 - - lerc=4.0.0=h6470a55_1 - - libaec=1.1.4=h20038f6_0 - - libblas=3.9.0=35_h5709861_mkl - - libbrotlicommon=1.2.0=hc82b238_0 - - libbrotlidec=1.2.0=h431afc6_0 - - libbrotlienc=1.2.0=ha521d6b_0 - - libcblas=3.9.0=35_h2a3cdd5_mkl - - libcurl=8.17.0=h43ecb02_0 - - libdeflate=1.25=h51727cc_0 - - libdlf=0.3.0=pyhd8ed1ab_1 - - libexpat=2.7.3=hac47afa_0 - - libffi=3.5.2=h52bdfb6_0 - - libfreetype=2.14.1=h57928b3_0 - - libfreetype6=2.14.1=hdbac1cb_0 - - libgcc=15.2.0=h1383e82_7 - - libgomp=15.2.0=h1383e82_7 - - libhwloc=2.12.1=default_h64bd3f2_1002 - - libiconv=1.18=hc1393d2_2 - - libjpeg-turbo=3.1.2=hfd05255_0 - - liblapack=3.9.0=35_hf9ab0e9_mkl - - liblzma=5.8.1=h2466b09_2 - - libpng=1.6.50=h7351971_1 - - libspatialindex=2.0.0=h5a68840_0 - - libsqlite=3.51.0=hf5d6505_0 - - libssh2=1.11.1=h9aa295b_0 - - libtiff=4.7.1=h8f73337_1 - - libwebp-base=1.6.0=h4d5522a_0 - - libwinpthread=12.0.0.r4.gg4f2fc60ca=h57928b3_10 - - libxcb=1.17.0=h0e4246c_0 - - libxml2=2.15.1=h5d26750_0 - - libxml2-16=2.15.1=h692994f_0 - - libzlib=1.3.1=h2466b09_2 - - llvm-openmp=21.1.6=h4fa8253_0 - - locket=1.0.0=pyhd8ed1ab_0 - - markupsafe=3.0.3=py312h05f76fc_0 - - matplotlib-base=3.8.4=py312hfee7060_2 - - mkl=2024.2.2=h57928b3_16 - - msgpack-python=1.1.2=py312hf90b1b7_1 - - mumps-seq=5.7.3=hbaa6519_10 - - munkres=1.1.4=pyhd8ed1ab_1 - - numcodecs=0.15.1=py312h72972c8_0 - - numpy=1.26.4=py312h8753938_0 - - openjpeg=2.5.4=h24db6dd_0 - - openssl=3.6.0=h725018a_0 - - packaging=25.0=pyh29332c3_1 - - pandas=2.3.3=py312hc128f0a_1 - - partd=1.4.2=pyhd8ed1ab_0 - - pillow=10.3.0=py312h381445a_1 - - pip=25.3=pyh8b19718_0 - - psutil=7.1.3=py312he5662c2_0 - - pthread-stubs=0.4=h0e40799_1002 - - pycparser=2.22=pyh29332c3_1 - - pydantic=2.12.4=pyh3cfb1c2_0 - - pydantic-core=2.41.5=py312hdabe01f_1 - - pydiso=0.1.2=py312h3fe0e52_1 - - pymatsolver=0.3.1=pyh48887ae_201 - - pyparsing=3.2.5=pyhcf101f3_0 - - pysocks=1.7.1=pyh09c184e_7 - - python=3.12.12=h0159041_1_cpython - - python-dateutil=2.9.0.post0=pyhe01879c_2 - - python-mumps=0.0.3=py312h8095395_0 - - python-tzdata=2025.2=pyhd8ed1ab_0 - - python_abi=3.12=8_cp312 - - pytz=2025.2=pyhd8ed1ab_0 - - pyyaml=6.0.3=py312h05f76fc_0 - - rtree=1.2.0=py312h50e5f8f_1 - - scikit-learn=1.6.1=py312h816cc57_0 - - scipy=1.14.1=py312h337df96_2 - - setuptools=80.9.0=pyhff2d567_0 - - six=1.17.0=pyhe01879c_1 - - sortedcontainers=2.4.0=pyhd8ed1ab_1 - - tbb=2021.13.0=hd094cb3_4 - - tblib=3.2.2=pyhcf101f3_0 - - threadpoolctl=3.6.0=pyhecae5ae_0 - - tk=8.6.13=h2c6b04d_3 - - toolz=1.1.0=pyhd8ed1ab_1 - - tornado=6.5.2=py312he06e257_2 - - tqdm=4.67.1=pyhd8ed1ab_1 - - trimesh=4.1.8=pyhd8ed1ab_0 - - typing-extensions=4.15.0=h396c80c_0 - - typing-inspection=0.4.2=pyhd8ed1ab_0 - - typing_extensions=4.15.0=pyhcf101f3_0 - - tzdata=2025b=h78e105d_0 - - ucrt=10.0.26100.0=h57928b3_0 - - unicodedata2=17.0.0=py312he06e257_1 - - urllib3=2.5.0=pyhd8ed1ab_0 - - vc=14.3=h2b53caa_32 - - vc14_runtime=14.44.35208=h818238b_32 - - vcomp14=14.44.35208=h818238b_32 - - wheel=0.45.1=pyhd8ed1ab_1 - - win_inet_pton=1.1.0=pyh7428d3b_8 - - wrapt=1.17.3=py312he06e257_1 - - xorg-libxau=1.0.12=hba3369d_1 - - xorg-libxdmcp=1.1.5=hba3369d_1 - - xyzservices=2025.10.0=pyhd8ed1ab_0 - - yaml=0.2.5=h6a83c73_3 - - zarr=2.14.2=pyhd8ed1ab_0 - - zict=3.0.0=pyhd8ed1ab_1 - - zipp=3.23.0=pyhd8ed1ab_0 - - zstandard=0.25.0=py312he5662c2_1 - - zstd=1.5.7=hbeecb71_2 - - pip: - - geoapps-utils @ git+https://github.com/MiraGeoscience/geoapps-utils.git@15d04763f768cb6f56a3049c9c83a12c88f3060f - - geoh5py @ git+https://github.com/MiraGeoscience/geoh5py.git@6e27ace156c5f5898a77ae96566dea1d90de8cd8 - - grid-apps @ git+https://github.com/MiraGeoscience/grid-apps.git@d6a42611003c184354e1367de41a88783b928166 - - mira-simpeg @ git+https://github.com/MiraGeoscience/simpeg.git@374bd3eb0266841ae256ff8fdbf96cfa6d20f469 - -variables: - KMP_WARNINGS: 0 diff --git a/get_conda_exec.bat b/get_conda_exec.bat deleted file mode 100644 index 496bc57d..00000000 --- a/get_conda_exec.bat +++ /dev/null @@ -1,60 +0,0 @@ -@echo off -setlocal EnableDelayedExpansion - -set custom_script="%~dp0get_custom_conda.bat" -if exist !custom_script! ( - call !custom_script! - if !ERRORLEVEL! neq 0 ( - echo ERROR: calling !custom_script! 1>&2 - exit /B !ERRORLEVEL! - ) - if [!MY_CONDA_EXE!] == [] ( - echo ERROR: MY_CONDA_EXE not set by !custom_script! 1>&2 - exit /B 1 - ) - call "!MY_CONDA_EXE:"=!" --version 2> NUL - if !ERRORLEVEL! neq 0 ( - echo ERROR: Failed executing Conda: !MY_CONDA_EXE! 1>&2 - echo Check definition of MY_CONDA_EXE in !custom_script! - exit /B !ERRORLEVEL! - ) - goto success -) - -:: reset error level -call (exit /B 0) - -set usual_conda_install_locations=^ - "%LOCALAPPDATA%";^ - "%USERPROFILE%";^ - "%ProgramData%"; - -set conda_distributions=^ - "miniforge3";^ - "mambaforge";^ - "miniconda3";^ - "anaconda3";^ - "Continuum\miniconda3";^ - "Continuum\anaconda3";^ - - -set conda_bat_subpath=Library\bin\conda.bat - -for %%p in (%usual_conda_install_locations%) do ( - for %%d in (%conda_distributions%) do ( - set base_path=%%p\%%d - set conda_path="!base_path:"=!\%conda_bat_subpath%" - if exist !conda_path! ( - set MY_CONDA_EXE=!conda_path! - goto success - ) - ) -) -echo Error: Failed to find conda.bat 1>&2 -echo You can define a custom Conda location with in !custom_script! -exit /B 1 - -:success - echo Using Conda: !MY_CONDA_EXE! - endlocal & set MY_CONDA_EXE=%MY_CONDA_EXE% - exit /B 0 diff --git a/get_custom_conda.bat.example b/get_custom_conda.bat.example deleted file mode 100644 index a235ea7d..00000000 --- a/get_custom_conda.bat.example +++ /dev/null @@ -1 +0,0 @@ -set MY_CONDA_EXE=C:\custom\path\to\conda.bat diff --git a/install.bat b/install.bat deleted file mode 100644 index 7f1b0be4..00000000 --- a/install.bat +++ /dev/null @@ -1,39 +0,0 @@ -@echo off -setlocal EnableDelayedExpansion - -call "%~dp0get_conda_exec.bat" -if !errorlevel! neq 0 ( - pause - exit /B !errorlevel! -) - -set PY_VER=3.10 - -set ENV_NAME=simpeg_drivers -set MY_CONDA=!MY_CONDA_EXE:"=! -cd %~dp0 -set PYTHONUTF8=1 -set CONDA_CHANNEL_PRIORITY=strict - -:: all dependencies are installed from conda -set PIP_NO_DEPS=1 - -set MY_CONDA_ENV_FILE=environments\py-%PY_VER%-win-64-dev.conda.lock.yml -if not exist %MY_CONDA_ENV_FILE% ( - echo "** ERROR: Could not find the conda environment specification file '%MY_CONDA_ENV_FILE%' **" - pause - exit /B 0 -) - -call "!MY_CONDA!" activate base ^ - && call "!MY_CONDA!" env create -y -n %ENV_NAME% --file %MY_CONDA_ENV_FILE% ^ - && call "!MY_CONDA!" run -n %ENV_NAME% pip install -e . --no-deps - -if !errorlevel! neq 0 ( - echo "** ERROR: Installation failed **" - pause - exit /B !errorlevel! -) - -pause -cmd /k "!MY_CONDA!" activate base diff --git a/pixi.lock b/pixi.lock new file mode 100644 index 00000000..24773915 --- /dev/null +++ b/pixi.lock @@ -0,0 +1,10753 @@ +version: 6 +environments: + default: + channels: + - url: https://repo.prefix.dev/conda-forge/ + indexes: + - https://pypi.org/simple + options: + pypi-prerelease-mode: if-necessary-or-explicit + packages: + linux-64: + - conda: https://repo.prefix.dev/conda-forge/linux-64/_openmp_mutex-4.5-7_kmp_llvm.conda + - conda: https://repo.prefix.dev/conda-forge/noarch/annotated-types-0.7.0-pyhd8ed1ab_1.conda + - conda: https://repo.prefix.dev/conda-forge/noarch/asciitree-0.3.3-py_2.tar.bz2 + - conda: https://repo.prefix.dev/conda-forge/linux-64/astroid-4.0.2-py310hff52083_0.conda + - conda: https://repo.prefix.dev/conda-forge/noarch/asttokens-3.0.1-pyhd8ed1ab_0.conda + - conda: https://repo.prefix.dev/conda-forge/linux-64/backports.zstd-1.2.0-py310h69bd2ac_0.conda + - conda: https://repo.prefix.dev/conda-forge/noarch/bokeh-3.6.3-pyhd8ed1ab_0.conda + - conda: https://repo.prefix.dev/conda-forge/linux-64/brotli-1.2.0-hed03a55_1.conda + - conda: https://repo.prefix.dev/conda-forge/linux-64/brotli-bin-1.2.0-hb03c661_1.conda + - conda: https://repo.prefix.dev/conda-forge/linux-64/brotli-python-1.2.0-py310hba01987_1.conda + - conda: https://repo.prefix.dev/conda-forge/linux-64/bzip2-1.0.8-hda65f42_8.conda + - conda: 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+numpy = "1.26.*" +pydantic = ">=2.12.0, 2.*" +rtree = "1.2.*" +scikit-learn = "1.6.*" +scipy = "1.14.*" +tqdm = ">=4.66.1, 4.*" +trimesh = ">=4.1.3, 4.1.*" +# Simpeg solvers (get both for convenience, even if only one is needed) +pydiso = "0.1.*" +python-mumps = ">=0.0.3, <0.0.4.dev" + +## indirect dependencies from remaining pip packages: +#---------------------------------------------------- +pillow = "10.3.*" +bokeh = "3.6.*" +fsspec = ">=2022.0" +geoana = ">=0.7.0, 0.7.*" +h5py = ">=3.2.1, 3.*" +matplotlib-base = ">=3.8.4, 3.8.*" +pymatsolver = "0.3.*" +zarr = ">=2.14.2, 2.14.*" + +[pypi-dependencies] +simpeg-drivers = {path = ".", editable = true} + +[environments] +#prod-py310 = { features = ["py310", "blas-mkl", "mirageo"], solve-group = "prod-py310" } +#prod-py311 = { features = ["py311", "blas-mkl", "mirageo"], solve-group = "prod-py311" } +#prod-py312 = { features = ["py312", "blas-mkl", "mirageo"], solve-group = "prod-py312" } +#test-prod-py310 = { features = ["py310", "blas-mkl", "mirageo", "test"], solve-group = "prod-py310" } +#test-prod-py311 = { features = ["py311", "blas-mkl", "mirageo", "test"], solve-group = "prod-py311" } +#test-prod-py312 = { features = ["py312", "blas-mkl", "mirageo", "test"], solve-group = "prod-py312" } + +py310 = { features = ["py310", "blas-mkl", "mirageo-git", "test", "linter"], solve-group = "default" } +py311 = { features = ["py311", "blas-mkl", "mirageo-git", "test", "linter"] } +py312 = { features = ["py312", "blas-mkl", "mirageo-git", "test", "linter"] } + +default = { features = ["py310", "blas-mkl", "mirageo-git", "test", "dev", "linter"], solve-group = "default" } +linter = { features = ["py310", "blas-mkl", "mirageo-git", "test", "linter"], solve-group = "default" } +mirageo-local = { features = ["py310", "blas-mkl", "mirageo-git"], solve-group = "default" } +docs = {features = ["py310", "doc"], solve-group = "default"} +distrib = { features = ["distrib"], no-default-feature = true } + +[feature.py310.dependencies] +python = "3.10.*" + +[feature.py311.dependencies] +python = "3.11.*" + +[feature.py312.dependencies] +python = "3.12.*" + +#[tool.pixi.feature.mirageo.dependencies] +# geoapps-utils = ">=0.7.0a, 0.7.*" +# geoh5py = ">=0.13.0a, 0.13.*" +# grid-apps = ">=0.2.0a, 0.2.*" +# mira-simpeg = ">=0.23.0.3a, 0.23.0.*" + +[feature.mirageo-git.pypi-dependencies] +geoapps-utils = { git = "https://github.com/MiraGeoscience/geoapps-utils.git", rev = "develop" } +geoh5py = { git = "https://github.com/MiraGeoscience/geoh5py.git", rev = "develop" } +grid-apps = { git = "https://github.com/MiraGeoscience/grid-apps.git", rev = "develop" } +mira-simpeg = { git = "https://github.com/MiraGeoscience/simpeg.git", rev = "develop" } + +[feature.dev.dependencies] +docutils = "*" +ipython = "*" +pixi-pycharm = ">=0.0.10,<0.0.11" +pygments = "*" + +[feature.blas-mkl.dependencies] +libblas = {version = "*", build = "*mkl"} # because simpeg already brings in the MKL +mkl = ">=2024.2.2" + +[feature.dev.tasks] +repl = {description = "Launch interactive Python shell (IPython)", cmd = "ipython"} + +[feature.test.dependencies] +packaging = "*" +pytest = "*" +pytest-cov = "*" +pytest-mock = "*" +pyyaml = "*" + +[feature.linter.dependencies] +pylint = "4.*" + +[feature.linter.tasks] +lint = {cmd = "pylint", description = "Run pylint"} + +[feature.test.tasks] +test = {cmd = "pytest --cov --cov-report=xml", description = "Run pytest with coverage reporting"} + +[feature.test.tasks.test-local] +description = "Run tests using local development versions of dependencies (e.g., ../geoh5py)" +args = [{ arg = "packages", default = "geoh5py simpeg-drivers grid-apps mira-simpeg" }] +depends-on = [ + {task = "use-local-deps", args = [ "{{ packages }}" ]}, + {task = "show-pip-source", args = [ "{{ packages }}" ]}, + {task = "test"} +] + +[feature.doc.dependencies] +jupyter-book = "1.0.*" +jupyter_client = "*" +jupytext = "*" +matplotlib-base = "*" +nbsphinx = "*" +nbstripout = "*" +notebook = "*" +numpydoc = "*" +scipy = "*" +sphinx = "*" +sphinx-autodoc-typehints = "*" +sphinx-issues = "*" +sphinx-rtd-theme = "*" +sphinxcontrib-bibtex = "*" +sphinxcontrib-googleanalytics = '*' + +[feature.doc.tasks.config-docs] +cmd = "jupyter-book config sphinx docs/" + +[feature.doc.tasks.build-docs] +args = [ + { arg = "builder", default = "html" }, + { arg = "outputdir", default = "docs/_build" }, +] + +depends-on = ["config-docs"] +# TODO: add -W option to fail on warnings +cmd = "export PYTHONPATH=./docs/_ext && sphinx-build -T -n -b {{builder}} docs/ {{outputdir}}/{{builder}}" + +[feature.doc.tasks.jupyter-book-build] +args = [ + { arg = "builder", default = "html" }, + { arg = "outputdir", default = "docs" }, +] + +# TODO: add -W option to fail on warnings +cmd = "jupyter-book build -v -n --builder {{builder}} docs --path-output {{outputdir}}" + +[tasks.show-pip-source] +description = "Display package metadata and installation source for given pip packages" +args = [{ arg = "packages", default = "geoh5py" }] +cmd = "uv pip show {{packages}}" + +[tasks.use-local-deps] +description = "Install local editable versions of packages from sibling directories (e.g., ../geoh5py)" +args = [{ arg = "packages", default = "geoh5py" }] +cmd = """ +uv pip install --no-deps --force-reinstall \ +{% for package in packages | split %} -e ../{{ package | trim }}{% endfor %} +""" + +[tasks.test-pyvers] +description = "Run tests across all Python versions (3.10, 3.11, 3.12)" +depends-on = [ + {task = "test", environment = "py310"}, + {task = "test", environment = "py311"}, + {task = "test", environment = "py312"}, +] + +[feature.distrib.tasks.export-to-conda] +description = "Export environment to conda environment YAML file (not locked)" +args = ["env", {arg = "output_name", default = "exported"}] +cmd = "pixi workspace export conda-environment -e {{ env }} {{ output_name }}.pixi.conda.yml" + +[feature.distrib.tasks.analyst-uijson-install] +description = "Install UI JSON files for Geoscience ANALYST integration" +args = [ + {arg = "env_name", default = "mirageo"}, + {arg = "menu", default = "local/simpeg-drivers"}, +] +cmd = "python ./install_uijson.py --env {{env_name}} --menu {{menu}}" + +[feature.distrib.tasks.analyst-env-install] +description = "Install conda environment in Geoscience ANALYST using MambaEnvRunner" +args = [ + {arg = "env_name", default = "src-simpeg-drivers"}, + {arg = "env_file_name", default = "simpeg-drivers"}, +] +env = { MIRA_CMD_RUNNER_DIR = "$ProgramFiles/Mira Geoscience/Geoscience ANALYST/CmdRunner" } +cmd = '"$MIRA_CMD_RUNNER_DIR/MambaEnvRunner.exe" --install "{{ env_file_name }}.pixi.conda.yml" --name {{env_name}}' +depends-on = [{task = "export-to-conda", args = ["mirageo-local", "{{ env_file_name }}"]}] + +[feature.distrib.tasks.analyst-install] +description = "Full installation to Geoscience ANALYST (environment + UI JSON files)" +args = [{arg = "tag", default = "local"}] +depends-on = [ + {task = 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See also the "--disable" option for examples. -enable=c-extension-no-member - - -[BASIC] - -# Naming style matching correct argument names. -argument-naming-style=snake_case - -# Regular expression matching correct argument names. Overrides argument- -# naming-style. If left empty, argument names will be checked with the set -# naming style. -#argument-rgx= - -# Naming style matching correct attribute names. -attr-naming-style=snake_case - -# Regular expression matching correct attribute names. Overrides attr-naming- -# style. If left empty, attribute names will be checked with the set naming -# style. -#attr-rgx= - -# Bad variable names which should always be refused, separated by a comma. -bad-names=foo, - bar, - baz, - toto, - tutu, - tata - -# Bad variable names regexes, separated by a comma. If names match any regex, -# they will always be refused -bad-names-rgxs= - -# Naming style matching correct class attribute names. -class-attribute-naming-style=any - -# Regular expression matching correct class attribute names. Overrides class- -# attribute-naming-style. If left empty, class attribute names will be checked -# with the set naming style. -#class-attribute-rgx= - -# Naming style matching correct class constant names. -class-const-naming-style=UPPER_CASE - -# Regular expression matching correct class constant names. Overrides class- -# const-naming-style. If left empty, class constant names will be checked with -# the set naming style. -#class-const-rgx= - -# Naming style matching correct class names. -class-naming-style=PascalCase - -# Regular expression matching correct class names. Overrides class-naming- -# style. If left empty, class names will be checked with the set naming style. -#class-rgx= - -# Naming style matching correct constant names. -const-naming-style=UPPER_CASE - -# Regular expression matching correct constant names. Overrides const-naming- -# style. If left empty, constant names will be checked with the set naming -# style. -#const-rgx= - -# Minimum line length for functions/classes that require docstrings, shorter -# ones are exempt. -docstring-min-length=-1 - -# Naming style matching correct function names. -function-naming-style=snake_case - -# Regular expression matching correct function names. Overrides function- -# naming-style. If left empty, function names will be checked with the set -# naming style. -#function-rgx= - -# Good variable names which should always be accepted, separated by a comma. -good-names=i, - j, - k, - x, - y, - z, - ex, - Run, - id, - _ - -# Good variable names regexes, separated by a comma. If names match any regex, -# they will always be accepted -good-names-rgxs= - -# Include a hint for the correct naming format with invalid-name. -include-naming-hint=no - -# Naming style matching correct inline iteration names. -inlinevar-naming-style=any - -# Regular expression matching correct inline iteration names. Overrides -# inlinevar-naming-style. If left empty, inline iteration names will be checked -# with the set naming style. -#inlinevar-rgx= - -# Naming style matching correct method names. -method-naming-style=snake_case - -# Regular expression matching correct method names. Overrides method-naming- -# style. If left empty, method names will be checked with the set naming style. -#method-rgx= - -# Naming style matching correct module names. -module-naming-style=snake_case - -# Regular expression matching correct module names. Overrides module-naming- -# style. If left empty, module names will be checked with the set naming style. -#module-rgx= - -# Colon-delimited sets of names that determine each other's naming style when -# the name regexes allow several styles. -name-group= - -# Regular expression which should only match function or class names that do -# not require a docstring. -no-docstring-rgx=^_ - -# List of decorators that produce properties, such as abc.abstractproperty. Add -# to this list to register other decorators that produce valid properties. -# These decorators are taken in consideration only for invalid-name. -property-classes=abc.abstractproperty - -# Regular expression matching correct type variable names. If left empty, type -# variable names will be checked with the set naming style. -#typevar-rgx= - -# Naming style matching correct variable names. -variable-naming-style=snake_case - -# Regular expression matching correct variable names. Overrides variable- -# naming-style. If left empty, variable names will be checked with the set -# naming style. -#variable-rgx= - - -[CLASSES] - -# Warn about protected attribute access inside special methods -check-protected-access-in-special-methods=no - -# List of method names used to declare (i.e. assign) instance attributes. -defining-attr-methods=__init__, - __new__, - setUp, - __post_init__ - -# List of member names, which should be excluded from the protected access -# warning. -exclude-protected=_asdict, - _fields, - _replace, - _source, - _make - -# List of valid names for the first argument in a class method. -valid-classmethod-first-arg=cls - -# List of valid names for the first argument in a metaclass class method. -valid-metaclass-classmethod-first-arg=cls - - -[DESIGN] - -# List of regular expressions of class ancestor names to ignore when counting -# public methods (see R0903) -exclude-too-few-public-methods= - -# List of qualified class names to ignore when counting class parents (see -# R0901) -ignored-parents= - -# Maximum number of arguments for function / method. -max-args=9 # as long as not hitting too-many-positional-arguments - -# Maximum number of attributes for a class (see R0902). -max-attributes=15 - -# Maximum number of boolean expressions in an if statement (see R0916). -max-bool-expr=6 - -# Maximum number of branch for function / method body. -max-branches=13 - -# Maximum number of locals for function / method body. -max-locals=15 - -# Maximum number of parents for a class (see R0901). -max-parents=7 - -# Maximum number of public methods for a class (see R0904). -max-public-methods=20 - -# Maximum number of return / yield for function / method body. -max-returns=6 - -# Maximum number of statements in function / method body. -max-statements=65 - -# Minimum number of public methods for a class (see R0903). -min-public-methods=2 - - -[EXCEPTIONS] - -# Exceptions that will emit a warning when caught. -overgeneral-exceptions=builtins.BaseException, - builtins.Exception - - -[FORMAT] - -# Expected format of line ending, e.g. empty (any line ending), LF or CRLF. -expected-line-ending-format= - -# Regexp for a line that is allowed to be longer than the limit. -ignore-long-lines=^\s*(# )??$ - -# Number of spaces of indent required inside a hanging or continued line. -indent-after-paren=4 - -# String used as indentation unit. This is usually " " (4 spaces) or "\t" (1 -# tab). -indent-string=' ' - -# Maximum number of characters on a single line. -max-line-length=100 - -# Maximum number of lines in a module. -max-module-lines=1000 - -# Allow the body of a class to be on the same line as the declaration if body -# contains single statement. -single-line-class-stmt=no - -# Allow the body of an if to be on the same line as the test if there is no -# else. -single-line-if-stmt=no - - -[IMPORTS] - -# List of modules that can be imported at any level, not just the top level -# one. -allow-any-import-level= - -# Allow wildcard imports from modules that define __all__. -allow-wildcard-with-all=no - -# Deprecated modules which should not be used, separated by a comma. -deprecated-modules=optparse,tkinter.tix - -# Output a graph (.gv or any supported image format) of external dependencies -# to the given file (report RP0402 must not be disabled). -ext-import-graph= - -# Output a graph (.gv or any supported image format) of all (i.e. internal and -# external) dependencies to the given file (report RP0402 must not be -# disabled). -import-graph= - -# Output a graph (.gv or any supported image format) of internal dependencies -# to the given file (report RP0402 must not be disabled). -int-import-graph= - -# Force import order to recognize a module as part of the standard -# compatibility libraries. -known-standard-library= - -# Force import order to recognize a module as part of a third party library. -known-third-party=enchant - -# Couples of modules and preferred modules, separated by a comma. -preferred-modules= - - -[LOGGING] - -# The type of string formatting that logging methods do. `old` means using % -# formatting, `new` is for `{}` formatting. -logging-format-style=old - -# Logging modules to check that the string format arguments are in logging -# function parameter format. -logging-modules=logging - - -[MISCELLANEOUS] - -# List of note tags to take in consideration, separated by a comma. -notes=FIXME, - XXX, - TODO - -# Regular expression of note tags to take in consideration. -notes-rgx= - - -[REFACTORING] - -# Maximum number of nested blocks for function / method body -max-nested-blocks=5 - -# Complete name of functions that never returns. When checking for -# inconsistent-return-statements if a never returning function is called then -# it will be considered as an explicit return statement and no message will be -# printed. -never-returning-functions=sys.exit,argparse.parse_error - - -[SIMILARITIES] - -# Comments are removed from the similarity computation -ignore-comments=yes - -# Docstrings are removed from the similarity computation -ignore-docstrings=yes - -# Imports are removed from the similarity computation -ignore-imports=yes - -# Signatures are removed from the similarity computation -ignore-signatures=yes - -# Minimum lines number of a similarity. -min-similarity-lines=4 - - -[SPELLING] - -# Limits count of emitted suggestions for spelling mistakes. -max-spelling-suggestions=4 - -# Spelling dictionary name. Available dictionaries: none. To make it work, -# install the 'python-enchant' package. -spelling-dict= - -# List of comma separated words that should be considered directives if they -# appear at the beginning of a comment and should not be checked. -spelling-ignore-comment-directives=fmt: on,fmt: off,noqa:,noqa,nosec,isort:skip,mypy: - -# List of comma separated words that should not be checked. -spelling-ignore-words= - -# A path to a file that contains the private dictionary; one word per line. -spelling-private-dict-file= - -# Tells whether to store unknown words to the private dictionary (see the -# --spelling-private-dict-file option) instead of raising a message. -spelling-store-unknown-words=no - - -[STRING] - -# This flag controls whether inconsistent-quotes generates a warning when the -# character used as a quote delimiter is used inconsistently within a module. -check-quote-consistency=no - -# This flag controls whether the implicit-str-concat should generate a warning -# on implicit string concatenation in sequences defined over several lines. -check-str-concat-over-line-jumps=no - - -[TYPECHECK] - -# List of decorators that produce context managers, such as -# contextlib.contextmanager. Add to this list to register other decorators that -# produce valid context managers. -contextmanager-decorators=contextlib.contextmanager - -# List of members which are set dynamically and missed by pylint inference -# system, and so shouldn't trigger E1101 when accessed. Python regular -# expressions are accepted. -generated-members= - -# Tells whether to warn about missing members when the owner of the attribute -# is inferred to be None. -ignore-none=yes - -# This flag controls whether pylint should warn about no-member and similar -# checks whenever an opaque object is returned when inferring. The inference -# can return multiple potential results while evaluating a Python object, but -# some branches might not be evaluated, which results in partial inference. In -# that case, it might be useful to still emit no-member and other checks for -# the rest of the inferred objects. -ignore-on-opaque-inference=yes - -# List of symbolic message names to ignore for Mixin members. -ignored-checks-for-mixins=no-member, - not-async-context-manager, - not-context-manager, - attribute-defined-outside-init - -# List of class names for which member attributes should not be checked (useful -# for classes with dynamically set attributes). This supports the use of -# qualified names. -ignored-classes=optparse.Values,thread._local,_thread._local,argparse.Namespace - -# Show a hint with possible names when a member name was not found. The aspect -# of finding the hint is based on edit distance. -missing-member-hint=yes - -# The minimum edit distance a name should have in order to be considered a -# similar match for a missing member name. -missing-member-hint-distance=1 - -# The total number of similar names that should be taken in consideration when -# showing a hint for a missing member. -missing-member-max-choices=1 - -# Regex pattern to define which classes are considered mixins. -mixin-class-rgx=.*[Mm]ixin - -# List of decorators that change the signature of a decorated function. -signature-mutators= - - -[VARIABLES] - -# List of additional names supposed to be defined in builtins. Remember that -# you should avoid defining new builtins when possible. -additional-builtins= - -# Tells whether unused global variables should be treated as a violation. -allow-global-unused-variables=yes - -# List of names allowed to shadow builtins -allowed-redefined-builtins= - -# List of strings which can identify a callback function by name. A callback -# name must start or end with one of those strings. -callbacks=cb_, - _cb - -# A regular expression matching the name of dummy variables (i.e. expected to -# not be used). -dummy-variables-rgx=_+$|(_[a-zA-Z0-9_]*[a-zA-Z0-9]+?$)|dummy|^ignored_|^unused_ - -# Argument names that match this expression will be ignored. Default to name -# with leading underscore. -ignored-argument-names=_.*|^ignored_|^unused_ - -# Tells whether we should check for unused import in __init__ files. -init-import=no - -# List of qualified module names which can have objects that can redefine -# builtins. -redefining-builtins-modules=six.moves,past.builtins,future.builtins,builtins,io diff --git a/pyproject.toml b/pyproject.toml index e811d4e7..af68ad5e 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -1,11 +1,11 @@ [build-system] requires = [ "poetry-core>=1.8.0", - "poetry-dynamic-versioning>=1.9.1,<2.0", + "poetry-dynamic-versioning >=1.9.1, ==1.*", # list dependencies to work with PIP_NO_DEPS=1 "MarkupSafe>=2.0", - "dunamai>=1.25,<2.0", - "jinja2>=3.0,<4.0", + "dunamai >=1.25, ==1.*", + "jinja2 ==3.*", "packaging>=24.0", "tomlkit>=0.13", ] @@ -14,7 +14,7 @@ build-backend = "poetry_dynamic_versioning.backend" [project] name = "simpeg-drivers" -requires-python = '>=3.10,<4.0' +requires-python = ">=3.10, ==3.*" description = "Application to run SimPEG inversions with geoh5 files from Geoscience Analyst." license = "MIT" @@ -36,21 +36,44 @@ keywords = [ "open science", "simpeg", ] + readme = "package.rst" -dynamic = ["version", "dependencies", "classifiers"] +dynamic = ["version", "classifiers"] authors = [{ name = "Mira Geoscience", email = "support@mirageoscience.com" }] maintainers = [ { name = "Benjamin Kary", email = "benjamink@mirageoscience.com" }, { name = "Dominique Fournier", email = "dominiquef@mirageoscience.com" } ] +dependencies = [ + # Mira Geoscience packages + "geoh5py >=0.13.0a, ==0.13.*", + "grid-apps >=0.2.0a, ==0.2.*", + "geoapps-utils >=0.7.0a, ==0.7.*", + "mira-simpeg >=0.23.0.3a, <0.23.0.4.dev", + # other dependencies + "dask ==2025.3.*", + "discretize ==0.11.*", + "distributed ==2025.3.*", + "numpy ==1.26.*", + "pydantic >=2.12.0, ==2.*", + "rtree ==1.2.*", + "scikit-learn ==1.6.*", + "scipy ==1.14.*", + "tqdm >=4.66.1, ==4.*", + "trimesh >=4.1.3, ==4.1.*", + # Simpeg solvers (get both for convenience, even if only one is needed) + "pydiso ==0.1.*", + "python-mumps >=0.0.3, <0.0.4.dev", +] + [project.urls] repository = "https://github.com/MiraGeoscience/simpeg-drivers" documentation = "https://mirageoscience-simpeg-drivers.readthedocs-hosted.com/" homepage = "https://www.mirageoscience.com/mining-industry-software/python-integration/" [tool.poetry] -requires-poetry = '>=2.0,<3.0' +requires-poetry = "2.*" classifiers = [ "Development Status :: 4 - Beta", @@ -73,83 +96,8 @@ include = [ ] version = "0.0.0.dev0" -[tool.poetry.dependencies] -# note: py-deps-clock defines custom mapping from dask to dask-core -dask = ">=2025.3, <2025.4.dev" # also in simpeg[dask] - -discretize = "0.11.*" # also in simpeg, grid-apps -distributed = ">=2025.3, <2025.4.dev" # for dask[distributed] -numpy = "~1.26.0" # also in geoh5py, simpeg -pydantic = "^2.5.2" # also in geoh5py, curve-apps, geoapps-utils -Rtree = "~1.2.0" -scikit-learn = "~1.6.0" -scipy = "~1.14.0" -tqdm = "^4.66.1" -trimesh = "~4.1.3" - -# solvers for simpeg: not imported, but at least one required at runtime -pydiso = ">=0.1.0, <0.2.dev" -python-mumps = ">=0.0.3, <0.0.4.dev" - -## Pip dependencies from Git repositories -#---------------------------------------- -#geoh5py = {version = ">=0.12.0b5, <0.13.dev", source = "pypi", allow-prereleases = true} -geoh5py = {git = "https://github.com/MiraGeoscience/geoh5py.git", rev = "develop"} - -#grid-apps = {version = ">=0.1.0b1, <0.2.dev", source = "pypi", allow-prereleases = true} -grid-apps = {git = "https://github.com/MiraGeoscience/grid-apps.git", rev = "develop"} - -#geoapps-utils = {version = ">=0.6.b2, <0.7.dev", source = "pypi", allow-prereleases = true} -geoapps-utils = {git = "https://github.com/MiraGeoscience/geoapps-utils.git", rev = "develop"} - -#mira-simpeg = {version = ">=0.23.0.2b1, <0.23.1.dev", source="pypi", allow-prereleases = true, extras = ["dask"]} -mira-simpeg = {git = "https://github.com/MiraGeoscience/simpeg.git", rev = "develop", extras = ["dask"]} - -## about pip dependencies -# to be specified to work with conda-lock -# - from PyPI: my_package = { version = "1.2.3", source = "pypi" } -# - from Artifactory : my_package = { version = "1.2.3" } -# - from URL: !!! no actual lock, as tag or branch can move and installation will fetch current !!! -# - for a tag: my_package = { url = "https://github.com/ORGANISATION/REPO/archive/refs/tags/TAG.tar.gz" } -# - for a branch: my_package = { url = "https://github.com/ORGANISATION/REPO/archive/refs/heads/BRANCH.tar.gz" } -# - to actually lock on a revision: my_package = { git = "https://github.com/ORGANISATION/REPO.git", rev = "GIT_REV" } -# (where rev value is a tag, a branch name or a commit hash). Can also use ``branch`` or ``tag`` instead of ``rev`` - -[tool.poetry.group.dev.dependencies] -Pygments = "*" -ipywidgets = "^7.6.5" -jupyter-book = "*" -jupytext = "^1.14" -pylint = "*" -pytest = "*" -pytest-cov = "*" -pyyaml = '*' -packaging = '*' -readthedocs-sphinx-ext = "*" -sphinx = "^5.0" -nbconvert = "~7.16.4" - -[tool.conda-lock] -platforms = ['win-64', 'linux-64'] -channels = ['conda-forge'] - -[tool.conda-lock.dependencies] -libblas = "*=*mkl" # because simpeg already brings in the MKL - -## indirect dependencies, forcing them here for installation through Conda not pip -#--------------------------------------------------------------------------------- -bokeh = ">=3.6.0, <3.7.dev" # optional, for dask reporting -fsspec = ">=2022.0" # from simpeg[dask] -geoana = ">=0.7.0, <0.8.dev" # from simpeg -h5py = ">=3.2.1, <4.0.dev" # from geoh5py -matplotlib-base = ">=3.8.4, <3.9.dev" # from geoapps-utils, simpeg -mkl = ">=2024.2.2" -Pillow = ">=10.3.0, <10.4.dev" # from geoh5py -pymatsolver = ">=0.3.0, <0.4.dev" # from simpeg -zarr = ">=2.14.2, <2.15.dev" # from simpeg[dask] - [tool.poetry.requires-plugins] -poetry-dynamic-versioning = { version = ">=1.9.1,<2.0.0", extras = ["plugin"] } +poetry-dynamic-versioning = { version = ">=1.9.1,==1.*", extras = ["plugin"] } [tool.poetry-dynamic-versioning] bump = true @@ -160,21 +108,23 @@ style = "pep440" vcs = "git" [tool.poetry-dynamic-versioning.substitution] -files = ["simpeg_drivers/_version.py", "recipe.yaml"] +files = ["simpeg_drivers/_version.py", "_version.json"] patterns = [ - { value = '''(^__version__\s*(?::.*?)?=\s*['"])[^'"]*(['"])''', mode = "str" }, - { value = '''(^\s*version\s*(?::.*?)?:\s*['"])[^'"]*(['"])''', mode = "str" }, + '''(^__version__\s*(?::.*?)?=\s*['"])[^'"]*(['"])''', + '''(^{\s*"version"\s*:\s*")[^"]*("\s*})''', ] [tool.poetry-dynamic-versioning.files."simpeg_drivers/_version.py"] persistent-substitution = true initial-content = """ - # Version placeholder that will be replaced during substitution - __version__ = "0.0.0" + __version__ = "0.0.0.dev0" """ -[tool.poetry-dynamic-versioning.files."recipe.yaml"] +[tool.poetry-dynamic-versioning.files."_version.json"] persistent-substitution = true +initial-content = """ +{ "version": "0.0.0.dev0" } +""" [tool.ruff] target-version = "py310" @@ -225,6 +175,64 @@ plugins = [ "numpy.typing.mypy_plugin", ] +[tool.pylint.main] +fail-on = ["F", "E", "W"] +fail-under = 10 +jobs = 0 +extension-pkg-allow-list = ["numpy", "scipy"] + +[tool.pylint.basic] +good-names = ["i", "j", "k", "x", "y", "z", "ex", "Run", "id", "_"] + +[tool.pylint.design] +max-args = 9 # Maximum number of arguments for function / method. + # (as long as not hitting too-many-positional-arguments) +max-attributes = 10 # Maximum number of attributes for a class (see R0902). +max-bool-expr = 6 # Maximum number of boolean expressions in an if statement (see R0916). +max-branches = 13 # Maximum number of branch for function / method body. +max-locals = 18 # Maximum number of locals for function / method body. +max-public-methods = 21 # Maximum number of public methods for a class (see R0904). +max-statements = 65 # Maximum number of statements in function / method body. +min-public-methods = 1 # Minimum number of public methods for a class (see R0903). + +[tool.pylint."messages control"] +disable = [ + "raw-checker-failed", + "bad-inline-option", + "locally-disabled", + "file-ignored", + "suppressed-message", + "useless-suppression", + "deprecated-pragma", + "use-symbolic-message-instead", + "use-implicit-booleaness-not-comparison-to-string", + "use-implicit-booleaness-not-comparison-to-zero", + "missing-module-docstring", + "missing-function-docstring", + "missing-class-docstring", + "fixme", + # TODO: re-enable refactoring warnings, and all the ones below + "R", + "arguments-differ", + "arguments-renamed", + "empty-docstring", + "import-outside-toplevel", + "invalid-name", + "line-too-long", + "superfluous-parens", + "ungrouped-imports", + "unused-import", + "unused-variable", + "wrong-import-position", +] +enable = ["c-extension-no-member"] + +[tool.pylint.similarities] +min-similarity-lines = 7 + +[tool.pytest.ini_options] +#addopts = + [tool.coverage.run] branch = true source = ["simpeg_drivers"] diff --git a/recipe.yaml b/recipe.yaml index 7f01b33b..e754107e 100644 --- a/recipe.yaml +++ b/recipe.yaml @@ -2,8 +2,8 @@ schema_version: 1 context: name: "simpeg-drivers" - version: "0.0.0.dev0" # This will be replaced by the actual version in the build process python_min: "3.10" + version: ${{ load_from_file("_version.json").version | trim }} module_name: ${{ name|lower|replace("-", "_") }} package: @@ -11,7 +11,7 @@ package: version: ${{ version }} source: - path: ../${{ name }} + path: . build: number: 0 @@ -20,40 +20,40 @@ build: requirements: host: - - python 3.10.* + - pip + - python ${{ python_min }}.* - poetry-core >=1.8.0 - - poetry-dynamic-versioning >=1.9, <2.0.dev + - poetry-dynamic-versioning >=1.9, 1.* - setuptools - - pip run: - python >=${{ python_min }} # Mira packages - - geoapps-utils >=0.6.0b2, <0.7.dev - - geoh5py >=0.12.0b5, <0.13.dev - - grid-apps >=0.1.0b1, <0.2.dev - - mira-simpeg >=0.23.0.2b1, <0.23.1.dev + - geoapps-utils >=0.7.0a, 0.7.* + - geoh5py >=0.13.0a, 0.13.* + - grid-apps >=0.2.0a, 0.2.* + - mira-simpeg >=0.23.0.3a, <0.23.0.4.dev # direct dependencies - - dask-core >=2025.3, <2025.4.dev - - discretize >=0.11.0, <0.12.dev - - distributed >=2025.3, <2025.4.dev - - numpy >=1.26.0, <1.27.dev - - pydantic >=2.5.2, <3.0.dev - - pydiso >=0.1.0, <0.2.dev + - dask-core 2025.3.* + - discretize 0.11.* + - distributed 2025.3.* + - numpy 1.26.* + - pydantic >=2.12.0, 2.* + - pydiso 0.1.* - python-mumps >=0.0.3, <0.0.4.dev - - rtree >=1.2.0, <1.3.dev - - scikit-learn >=1.6.0, <1.7.dev - - scipy >=1.14.0, <1.15.dev - - tqdm >=4.66.1, <5.0.dev - - trimesh >=4.1.3, <4.2.dev + - rtree 1.2.* + - scikit-learn 1.6.* + - scipy 1.14.* + - tqdm >=4.66.1, 4.* + - trimesh >=4.1.3, 4.1.* # constrain version for some indirect dependencies from SimPEG - - geoana >=0.7.0, <0.8.dev - - matplotlib-base >=3.8.4, <3.9.dev - - pymatsolver >=0.3.0, <0.4.dev - - zarr >=2.14.2, <2.15.dev + - geoana 0.7.* + - matplotlib-base >=3.8.4, 3.8.* + - pymatsolver 0.3.* + - zarr >=2.14.2, 2.14.* run_constraints: - __glibc >=2.17 - - bokeh >=3.6.0, <3.7.dev + - bokeh 3.6.* - fsspec >=2022.0 tests: diff --git a/simpeg_drivers-assets/uijson/direct_current_3d_forward.ui.json b/simpeg_drivers-assets/uijson/direct_current_3d_forward.ui.json index 1c34f697..65d25644 100644 --- a/simpeg_drivers-assets/uijson/direct_current_3d_forward.ui.json +++ b/simpeg_drivers-assets/uijson/direct_current_3d_forward.ui.json @@ -1,5 +1,5 @@ { - "version": "0.3.0-alpha.6", + "version": "0.4.0", "title": "Direct Current (DC) 3D Forward", "icon": "PotentialElectrode", "documentation": "https://mirageoscience-simpeg-drivers.readthedocs-hosted.com/en/latest/", @@ -80,7 +80,7 @@ "optional": true, "enabled": false, "label": "Elevation channel", - "tooltip": "Set elevation from channel. If not set the topography will be set from the geometry of the selected 'topography' object", + "tooltip": "Set elevation from channel. If not set the topography will be set from the geometry of the selected 'topography' object", "parent": "topography_object", "dependency": "topography_object", "dependencyType": "enabled", @@ -100,7 +100,7 @@ "dependency": "topography_object", "dependencyType": "disabled", "label": "Active model", - "tooltip": "Provide the active cell boolean model directly if topography not set", + "tooltip": "Provide the active cell Boolean model directly if topography not set", "parent": "mesh", "value": "" }, diff --git a/simpeg_drivers-assets/uijson/direct_current_3d_inversion.ui.json b/simpeg_drivers-assets/uijson/direct_current_3d_inversion.ui.json index be48c533..e543ac9a 100644 --- a/simpeg_drivers-assets/uijson/direct_current_3d_inversion.ui.json +++ b/simpeg_drivers-assets/uijson/direct_current_3d_inversion.ui.json @@ -1,5 +1,5 @@ { - "version": "0.3.0-alpha.6", + "version": "0.4.0", "title": "Direct Current (DC) 3D Inversion", "icon": "PotentialElectrode", "documentation": "https://mirageoscience-simpeg-drivers.readthedocs-hosted.com/en/latest/", @@ -153,7 +153,7 @@ "optional": true, "enabled": false, "label": "Elevation channel", - "tooltip": "Set elevation from channel. If not set the topography will be set from the geometry of the selected 'topography' object", + "tooltip": "Set elevation from channel. If not set the topography will be set from the geometry of the selected 'topography' object", "parent": "topography_object", "dependency": "topography_object", "dependencyType": "enabled", @@ -173,7 +173,7 @@ "dependency": "topography_object", "dependencyType": "disabled", "label": "Active model", - "tooltip": "Provide the active cell boolean model directly if topography not set", + "tooltip": "Provide the active cell Boolean model directly if topography not set", "parent": "mesh", "value": "" }, @@ -428,7 +428,7 @@ "min": 1, "enabled": true, "verbose": 3, - "tooltip": "Perform an Armijo backtracking linesearch for the provided number of iterations" + "tooltip": "Perform an Armijo backtracking line search for the provided number of iterations" }, "max_cg_iterations": { "min": 0, diff --git a/simpeg_drivers-assets/uijson/direct_current_batch2d_forward.ui.json b/simpeg_drivers-assets/uijson/direct_current_batch2d_forward.ui.json index 09183a83..f481914e 100644 --- a/simpeg_drivers-assets/uijson/direct_current_batch2d_forward.ui.json +++ b/simpeg_drivers-assets/uijson/direct_current_batch2d_forward.ui.json @@ -1,5 +1,5 @@ { - "version": "0.3.0-alpha.6", + "version": "0.4.0", "title": "Direct Current (DC) 2D Batch Forward", "icon": "PotentialElectrode", "documentation": "https://mirageoscience-simpeg-drivers.readthedocs-hosted.com/en/latest/", @@ -134,7 +134,7 @@ "optional": true, "enabled": false, "label": "Elevation channel", - "tooltip": "Set elevation from channel. If not set the topography will be set from the geometry of the selected 'topography' object", + "tooltip": "Set elevation from channel. If not set the topography will be set from the geometry of the selected 'topography' object", "parent": "topography_object", "dependency": "topography_object", "dependencyType": "enabled", @@ -154,7 +154,7 @@ "dependency": "topography_object", "dependencyType": "disabled", "label": "Active model", - "tooltip": "Provide the active cell boolean model directly if topography not set", + "tooltip": "Provide the active cell Boolean model directly if topography not set", "parent": "mesh", "value": "" }, diff --git a/simpeg_drivers-assets/uijson/direct_current_batch2d_inversion.ui.json b/simpeg_drivers-assets/uijson/direct_current_batch2d_inversion.ui.json index 48b5f1f3..d793940c 100644 --- a/simpeg_drivers-assets/uijson/direct_current_batch2d_inversion.ui.json +++ b/simpeg_drivers-assets/uijson/direct_current_batch2d_inversion.ui.json @@ -1,5 +1,5 @@ { - "version": "0.3.0-alpha.6", + "version": "0.4.0", "title": "Direct Current (DC) 2D Batch Inversion", "icon": "PotentialElectrode", "documentation": "https://mirageoscience-simpeg-drivers.readthedocs-hosted.com/en/latest/", @@ -192,7 +192,7 @@ "optional": true, "enabled": false, "label": "Elevation channel", - "tooltip": "Set elevation from channel. If not set the topography will be set from the geometry of the selected 'topography' object", + "tooltip": "Set elevation from channel. If not set the topography will be set from the geometry of the selected 'topography' object", "parent": "topography_object", "dependency": "topography_object", "dependencyType": "enabled", @@ -212,7 +212,7 @@ "dependency": "topography_object", "dependencyType": "disabled", "label": "Active model", - "tooltip": "Provide the active cell boolean model directly if topography not set", + "tooltip": "Provide the active cell Boolean model directly if topography not set", "parent": "mesh", "value": "" }, @@ -439,7 +439,7 @@ "min": 1, "enabled": true, "verbose": 3, - "tooltip": "Perform an Armijo backtracking linesearch for the provided number of iterations" + "tooltip": "Perform an Armijo backtracking line search for the provided number of iterations" }, "max_cg_iterations": { "min": 0, diff --git a/simpeg_drivers-assets/uijson/fdem1d_forward.ui.json b/simpeg_drivers-assets/uijson/fdem1d_forward.ui.json index fc69e236..8a423744 100644 --- a/simpeg_drivers-assets/uijson/fdem1d_forward.ui.json +++ b/simpeg_drivers-assets/uijson/fdem1d_forward.ui.json @@ -1,5 +1,5 @@ { - "version": "0.3.0-alpha.6", + "version": "0.4.0", "title": "Frequency-domain EM (FEM) 1D Forward", "icon": "surveyairborneem", "documentation": "https://mirageoscience-simpeg-drivers.readthedocs-hosted.com/en/latest/", @@ -133,7 +133,7 @@ "optional": true, "enabled": false, "label": "Elevation channel", - "tooltip": "Set elevation from channel. If not set the topography will be set from the geometry of the selected 'topography' object", + "tooltip": "Set elevation from channel. If not set the topography will be set from the geometry of the selected 'topography' object", "parent": "topography_object", "dependency": "topography_object", "dependencyType": "enabled", @@ -153,7 +153,7 @@ "dependency": "topography_object", "dependencyType": "disabled", "label": "Active model", - "tooltip": "Provide the active cell boolean model directly if topography not set", + "tooltip": "Provide the active cell Boolean model directly if topography not set", "parent": "mesh", "value": "" }, diff --git a/simpeg_drivers-assets/uijson/fdem1d_inversion.ui.json b/simpeg_drivers-assets/uijson/fdem1d_inversion.ui.json index fad47f73..fe8a1584 100644 --- a/simpeg_drivers-assets/uijson/fdem1d_inversion.ui.json +++ b/simpeg_drivers-assets/uijson/fdem1d_inversion.ui.json @@ -1,5 +1,5 @@ { - "version": "0.3.0-alpha.6", + "version": "0.4.0", "title": "Frequency-domain EM (FEM) 1D Inversion", "icon": "surveyairborneem", "documentation": "https://mirageoscience-simpeg-drivers.readthedocs-hosted.com/en/latest/", @@ -229,7 +229,7 @@ "optional": true, "enabled": false, "label": "Elevation channel", - "tooltip": "Set elevation from channel. If not set the topography will be set from the geometry of the selected 'topography' object", + "tooltip": "Set elevation from channel. If not set the topography will be set from the geometry of the selected 'topography' object", "parent": "topography_object", "dependency": "topography_object", "dependencyType": "enabled", @@ -249,7 +249,7 @@ "dependency": "topography_object", "dependencyType": "disabled", "label": "Active model", - "tooltip": "Provide the active cell boolean model directly if topography not set", + "tooltip": "Provide the active cell Boolean model directly if topography not set", "parent": "mesh", "value": "" }, @@ -463,7 +463,7 @@ "min": 1, "enabled": true, "verbose": 3, - "tooltip": "Perform an Armijo backtracking linesearch for the provided number of iterations" + "tooltip": "Perform an Armijo backtracking line search for the provided number of iterations" }, "max_cg_iterations": { "min": 0, diff --git a/simpeg_drivers-assets/uijson/fdem_forward.ui.json b/simpeg_drivers-assets/uijson/fdem_forward.ui.json index 6b16a9da..d8279797 100644 --- a/simpeg_drivers-assets/uijson/fdem_forward.ui.json +++ b/simpeg_drivers-assets/uijson/fdem_forward.ui.json @@ -1,5 +1,5 @@ { - "version": "0.3.0-alpha.6", + "version": "0.4.0", "title": "Frequency-domain EM (FEM) Forward", "icon": "surveyairborneem", "documentation": "https://mirageoscience-simpeg-drivers.readthedocs-hosted.com/en/latest/", @@ -93,7 +93,7 @@ "optional": true, "enabled": false, "label": "Elevation channel", - "tooltip": "Set elevation from channel. If not set the topography will be set from the geometry of the selected 'topography' object", + "tooltip": "Set elevation from channel. If not set the topography will be set from the geometry of the selected 'topography' object", "parent": "topography_object", "dependency": "topography_object", "dependencyType": "enabled", @@ -113,7 +113,7 @@ "dependency": "topography_object", "dependencyType": "disabled", "label": "Active model", - "tooltip": "Provide the active cell boolean model directly if topography not set", + "tooltip": "Provide the active cell Boolean model directly if topography not set", "parent": "mesh", "value": "" }, diff --git a/simpeg_drivers-assets/uijson/fdem_inversion.ui.json b/simpeg_drivers-assets/uijson/fdem_inversion.ui.json index 65075e17..d646f052 100644 --- a/simpeg_drivers-assets/uijson/fdem_inversion.ui.json +++ b/simpeg_drivers-assets/uijson/fdem_inversion.ui.json @@ -1,5 +1,5 @@ { - "version": "0.3.0-alpha.6", + "version": "0.4.0", "title": "Frequency-domain EM (FEM) Inversion", "icon": "surveyairborneem", "documentation": "https://mirageoscience-simpeg-drivers.readthedocs-hosted.com/en/latest/", @@ -189,7 +189,7 @@ "optional": true, "enabled": false, "label": "Elevation channel", - "tooltip": "Set elevation from channel. If not set the topography will be set from the geometry of the selected 'topography' object", + "tooltip": "Set elevation from channel. If not set the topography will be set from the geometry of the selected 'topography' object", "parent": "topography_object", "dependency": "topography_object", "dependencyType": "enabled", @@ -209,7 +209,7 @@ "dependency": "topography_object", "dependencyType": "disabled", "label": "Active model", - "tooltip": "Provide the active cell boolean model directly if topography not set", + "tooltip": "Provide the active cell Boolean model directly if topography not set", "parent": "mesh", "value": "" }, @@ -464,7 +464,7 @@ "min": 1, "enabled": true, "verbose": 3, - "tooltip": "Perform an Armijo backtracking linesearch for the provided number of iterations" + "tooltip": "Perform an Armijo backtracking line search for the provided number of iterations" }, "max_cg_iterations": { "min": 0, diff --git a/simpeg_drivers-assets/uijson/gravity_forward.ui.json b/simpeg_drivers-assets/uijson/gravity_forward.ui.json index 815babf1..24bb730d 100644 --- a/simpeg_drivers-assets/uijson/gravity_forward.ui.json +++ b/simpeg_drivers-assets/uijson/gravity_forward.ui.json @@ -1,5 +1,5 @@ { - "version": "0.3.0-alpha.6", + "version": "0.4.0", "title": "Gravity Forward", "icon": "surveyairbornegravity", "documentation": "https://mirageoscience-simpeg-drivers.readthedocs-hosted.com/en/latest/", @@ -136,7 +136,7 @@ "optional": true, "enabled": false, "label": "Elevation channel", - "tooltip": "Set elevation from channel. If not set the topography will be set from the geometry of the selected 'topography' object", + "tooltip": "Set elevation from channel. If not set the topography will be set from the geometry of the selected 'topography' object", "parent": "topography_object", "dependency": "topography_object", "dependencyType": "enabled", @@ -156,7 +156,7 @@ "dependency": "topography_object", "dependencyType": "disabled", "label": "Active model", - "tooltip": "Provide the active cell boolean model directly if topography not set", + "tooltip": "Provide the active cell Boolean model directly if topography not set", "parent": "mesh", "value": "" }, diff --git a/simpeg_drivers-assets/uijson/gravity_inversion.ui.json b/simpeg_drivers-assets/uijson/gravity_inversion.ui.json index cefeff92..74b130b6 100644 --- a/simpeg_drivers-assets/uijson/gravity_inversion.ui.json +++ b/simpeg_drivers-assets/uijson/gravity_inversion.ui.json @@ -1,5 +1,5 @@ { - "version": "0.3.0-alpha.6", + "version": "0.4.0", "title": "Gravity Inversion", "icon": "surveyairbornegravity", "documentation": "https://mirageoscience-simpeg-drivers.readthedocs-hosted.com/en/latest/", @@ -422,7 +422,7 @@ "optional": true, "enabled": false, "label": "Elevation channel", - "tooltip": "Set elevation from channel. If not set the topography will be set from the geometry of the selected 'topography' object", + "tooltip": "Set elevation from channel. If not set the topography will be set from the geometry of the selected 'topography' object", "parent": "topography_object", "dependency": "topography_object", "dependencyType": "enabled", @@ -442,7 +442,7 @@ "dependency": "topography_object", "dependencyType": "disabled", "label": "Active model", - "tooltip": "Provide the active cell boolean model directly if topography not set", + "tooltip": "Provide the active cell Boolean model directly if topography not set", "parent": "mesh", "value": "" }, @@ -696,7 +696,7 @@ "min": 1, "enabled": true, "verbose": 3, - "tooltip": "Perform an Armijo backtracking linesearch for the provided number of iterations" + "tooltip": "Perform an Armijo backtracking line search for the provided number of iterations" }, "max_cg_iterations": { "min": 0, diff --git a/simpeg_drivers-assets/uijson/induced_polarization_3d_forward.ui.json b/simpeg_drivers-assets/uijson/induced_polarization_3d_forward.ui.json index 21d98ba4..879d62de 100644 --- a/simpeg_drivers-assets/uijson/induced_polarization_3d_forward.ui.json +++ b/simpeg_drivers-assets/uijson/induced_polarization_3d_forward.ui.json @@ -1,5 +1,5 @@ { - "version": "0.3.0-alpha.6", + "version": "0.4.0", "title": "Induced Polarization (IP) 3D Forward", "icon": "PotentialElectrode", "documentation": "https://mirageoscience-simpeg-drivers.readthedocs-hosted.com/en/latest/", @@ -96,7 +96,7 @@ "optional": true, "enabled": false, "label": "Elevation channel", - "tooltip": "Set elevation from channel. If not set the topography will be set from the geometry of the selected 'topography' object", + "tooltip": "Set elevation from channel. If not set the topography will be set from the geometry of the selected 'topography' object", "parent": "topography_object", "dependency": "topography_object", "dependencyType": "enabled", @@ -116,7 +116,7 @@ "dependency": "topography_object", "dependencyType": "disabled", "label": "Active model", - "tooltip": "Provide the active cell boolean model directly if topography not set", + "tooltip": "Provide the active cell Boolean model directly if topography not set", "parent": "mesh", "value": "" }, diff --git a/simpeg_drivers-assets/uijson/induced_polarization_3d_inversion.ui.json b/simpeg_drivers-assets/uijson/induced_polarization_3d_inversion.ui.json index adfc6b7a..595e8457 100644 --- a/simpeg_drivers-assets/uijson/induced_polarization_3d_inversion.ui.json +++ b/simpeg_drivers-assets/uijson/induced_polarization_3d_inversion.ui.json @@ -1,5 +1,5 @@ { - "version": "0.3.0-alpha.6", + "version": "0.4.0", "title": "Induced Polarization (IP) 3D Inversion", "icon": "PotentialElectrode", "documentation": "https://mirageoscience-simpeg-drivers.readthedocs-hosted.com/en/latest/", @@ -169,7 +169,7 @@ "optional": true, "enabled": false, "label": "Elevation channel", - "tooltip": "Set elevation from channel. If not set the topography will be set from the geometry of the selected 'topography' object", + "tooltip": "Set elevation from channel. If not set the topography will be set from the geometry of the selected 'topography' object", "parent": "topography_object", "dependency": "topography_object", "dependencyType": "enabled", @@ -189,7 +189,7 @@ "dependency": "topography_object", "dependencyType": "disabled", "label": "Active model", - "tooltip": "Provide the active cell boolean model directly if topography not set", + "tooltip": "Provide the active cell Boolean model directly if topography not set", "parent": "mesh", "value": "" }, @@ -444,7 +444,7 @@ "min": 1, "enabled": true, "verbose": 3, - "tooltip": "Perform an Armijo backtracking linesearch for the provided number of iterations" + "tooltip": "Perform an Armijo backtracking line search for the provided number of iterations" }, "max_cg_iterations": { "min": 0, diff --git a/simpeg_drivers-assets/uijson/induced_polarization_batch2d_forward.ui.json b/simpeg_drivers-assets/uijson/induced_polarization_batch2d_forward.ui.json index e719e737..fcba512f 100644 --- a/simpeg_drivers-assets/uijson/induced_polarization_batch2d_forward.ui.json +++ b/simpeg_drivers-assets/uijson/induced_polarization_batch2d_forward.ui.json @@ -1,5 +1,5 @@ { - "version": "0.3.0-alpha.6", + "version": "0.4.0", "title": "Induced Polarization (IP) 2D Batch Forward", "icon": "PotentialElectrode", "documentation": "https://mirageoscience-simpeg-drivers.readthedocs-hosted.com/en/latest/", @@ -145,7 +145,7 @@ "optional": true, "enabled": false, "label": "Elevation channel", - "tooltip": "Set elevation from channel. If not set the topography will be set from the geometry of the selected 'topography' object", + "tooltip": "Set elevation from channel. If not set the topography will be set from the geometry of the selected 'topography' object", "parent": "topography_object", "dependency": "topography_object", "dependencyType": "enabled", @@ -165,7 +165,7 @@ "dependency": "topography_object", "dependencyType": "disabled", "label": "Active model", - "tooltip": "Provide the active cell boolean model directly if topography not set", + "tooltip": "Provide the active cell Boolean model directly if topography not set", "parent": "mesh", "value": "" }, diff --git a/simpeg_drivers-assets/uijson/induced_polarization_batch2d_inversion.ui.json b/simpeg_drivers-assets/uijson/induced_polarization_batch2d_inversion.ui.json index cd996c8a..3ea8e544 100644 --- a/simpeg_drivers-assets/uijson/induced_polarization_batch2d_inversion.ui.json +++ b/simpeg_drivers-assets/uijson/induced_polarization_batch2d_inversion.ui.json @@ -1,5 +1,5 @@ { - "version": "0.3.0-alpha.6", + "version": "0.4.0", "title": "Induced Polarization (IP) 2D Batch Inversion", "icon": "PotentialElectrode", "documentation": "https://mirageoscience-simpeg-drivers.readthedocs-hosted.com/en/latest/", @@ -203,7 +203,7 @@ "optional": true, "enabled": false, "label": "Elevation channel", - "tooltip": "Set elevation from channel. If not set the topography will be set from the geometry of the selected 'topography' object", + "tooltip": "Set elevation from channel. If not set the topography will be set from the geometry of the selected 'topography' object", "parent": "topography_object", "dependency": "topography_object", "dependencyType": "enabled", @@ -223,7 +223,7 @@ "dependency": "topography_object", "dependencyType": "disabled", "label": "Active model", - "tooltip": "Provide the active cell boolean model directly if topography not set", + "tooltip": "Provide the active cell Boolean model directly if topography not set", "parent": "mesh", "value": "" }, @@ -451,7 +451,7 @@ "min": 1, "enabled": true, "verbose": 3, - "tooltip": "Perform an Armijo backtracking linesearch for the provided number of iterations" + "tooltip": "Perform an Armijo backtracking line search for the provided number of iterations" }, "max_cg_iterations": { "min": 0, diff --git a/simpeg_drivers-assets/uijson/joint_cross_gradient_inversion.ui.json b/simpeg_drivers-assets/uijson/joint_cross_gradient_inversion.ui.json index 706f55b2..4fa16cfc 100644 --- a/simpeg_drivers-assets/uijson/joint_cross_gradient_inversion.ui.json +++ b/simpeg_drivers-assets/uijson/joint_cross_gradient_inversion.ui.json @@ -1,5 +1,5 @@ { - "version": "0.3.0-alpha.6", + "version": "0.4.0", "title": "Joint Cross Gradient Inversion", "icon": "function", "documentation": "https://mirageoscience-simpeg-drivers.readthedocs-hosted.com/en/latest/", @@ -126,7 +126,7 @@ "optional": true, "enabled": false, "label": "Elevation channel", - "tooltip": "Set elevation from channel. If not set the topography will be set from the geometry of the selected 'topography' object", + "tooltip": "Set elevation from channel. If not set the topography will be set from the geometry of the selected 'topography' object", "parent": "topography_object", "dependency": "topography_object", "dependencyType": "enabled", @@ -146,7 +146,7 @@ "dependency": "topography_object", "dependencyType": "disabled", "label": "Active model", - "tooltip": "Provide the active cell boolean model directly if topography not set", + "tooltip": "Provide the active cell Boolean model directly if topography not set", "parent": "mesh", "value": "" }, @@ -386,7 +386,7 @@ "min": 1, "enabled": true, "verbose": 3, - "tooltip": "Perform an Armijo backtracking linesearch for the provided number of iterations" + "tooltip": "Perform an Armijo backtracking line search for the provided number of iterations" }, "max_cg_iterations": { "min": 0, diff --git a/simpeg_drivers-assets/uijson/joint_petrophysics_inversion.ui.json b/simpeg_drivers-assets/uijson/joint_petrophysics_inversion.ui.json index 1227e097..a3c3c2d6 100644 --- a/simpeg_drivers-assets/uijson/joint_petrophysics_inversion.ui.json +++ b/simpeg_drivers-assets/uijson/joint_petrophysics_inversion.ui.json @@ -1,7 +1,7 @@ { - "version": "0.3.0-alpha.4", + "version": "0.4.0", "title": "Joint Petrophysically Guided Inversion (PGI)", - "icon": "", + "icon": "referencedata", "documentation": "https://mirageoscience-simpeg-drivers.readthedocs-hosted.com/en/latest/", "conda_environment": "simpeg_drivers", "run_command": "simpeg_drivers.driver", @@ -117,7 +117,7 @@ "optional": true, "enabled": false, "label": "Elevation channel", - "tooltip": "Set elevation from channel. If not set the topography will be set from the geometry of the selected 'topography' object", + "tooltip": "Set elevation from channel. If not set the topography will be set from the geometry of the selected 'topography' object", "parent": "topography_object", "dependency": "topography_object", "dependencyType": "enabled", @@ -137,7 +137,7 @@ "dependency": "topography_object", "dependencyType": "disabled", "label": "Active model", - "tooltip": "Provide the active cell boolean model directly if topography not set", + "tooltip": "Provide the active cell Boolean model directly if topography not set", "parent": "mesh", "value": "" }, @@ -354,7 +354,7 @@ "min": 1, "enabled": true, "verbose": 3, - "tooltip": "Perform an Armijo backtracking linesearch for the provided number of iterations" + "tooltip": "Perform an Armijo backtracking line search for the provided number of iterations" }, "max_cg_iterations": { "min": 0, diff --git a/simpeg_drivers-assets/uijson/joint_surveys_inversion.ui.json b/simpeg_drivers-assets/uijson/joint_surveys_inversion.ui.json index d03547fb..19279dd4 100644 --- a/simpeg_drivers-assets/uijson/joint_surveys_inversion.ui.json +++ b/simpeg_drivers-assets/uijson/joint_surveys_inversion.ui.json @@ -1,5 +1,5 @@ { - "version": "0.3.0-alpha.6", + "version": "0.4.0", "title": "Joint Surveys Inversion", "icon": "model", "documentation": "https://mirageoscience-simpeg-drivers.readthedocs-hosted.com/en/latest/", @@ -158,7 +158,7 @@ "optional": true, "enabled": false, "label": "Elevation channel", - "tooltip": "Set elevation from channel. If not set the topography will be set from the geometry of the selected 'topography' object", + "tooltip": "Set elevation from channel. If not set the topography will be set from the geometry of the selected 'topography' object", "parent": "topography_object", "dependency": "topography_object", "dependencyType": "enabled", @@ -178,7 +178,7 @@ "dependency": "topography_object", "dependencyType": "disabled", "label": "Active model", - "tooltip": "Provide the active cell boolean model directly if topography not set", + "tooltip": "Provide the active cell Boolean model directly if topography not set", "parent": "mesh", "value": "" }, @@ -433,7 +433,7 @@ "min": 1, "enabled": true, "verbose": 3, - "tooltip": "Perform an Armijo backtracking linesearch for the provided number of iterations" + "tooltip": "Perform an Armijo backtracking line search for the provided number of iterations" }, "max_cg_iterations": { "min": 0, diff --git a/simpeg_drivers-assets/uijson/magnetic_scalar_inversion.ui.json b/simpeg_drivers-assets/uijson/magnetic_scalar_inversion.ui.json index d06a9299..f37e0fa5 100644 --- a/simpeg_drivers-assets/uijson/magnetic_scalar_inversion.ui.json +++ b/simpeg_drivers-assets/uijson/magnetic_scalar_inversion.ui.json @@ -1,5 +1,5 @@ { - "version": "0.3.0-beta.1", + "version": "0.4.0", "title": "Magnetic Inversion", "icon": "surveyairbornemagnetics", "documentation": "https://mirageoscience-simpeg-drivers.readthedocs-hosted.com/en/latest/", @@ -455,7 +455,7 @@ "optional": true, "enabled": false, "label": "Elevation channel", - "tooltip": "Set elevation from channel. If not set the topography will be set from the geometry of the selected 'topography' object", + "tooltip": "Set elevation from channel. If not set the topography will be set from the geometry of the selected 'topography' object", "parent": "topography_object", "dependency": "topography_object", "dependencyType": "enabled", @@ -475,7 +475,7 @@ "dependency": "topography_object", "dependencyType": "disabled", "label": "Active model", - "tooltip": "Provide the active cell boolean model directly if topography not set", + "tooltip": "Provide the active cell Boolean model directly if topography not set", "parent": "mesh", "value": "" }, @@ -729,7 +729,7 @@ "min": 1, "enabled": true, "verbose": 3, - "tooltip": "Perform an Armijo backtracking linesearch for the provided number of iterations" + "tooltip": "Perform an Armijo backtracking line search for the provided number of iterations" }, "max_cg_iterations": { "min": 0, diff --git a/simpeg_drivers-assets/uijson/magnetic_vector_forward.ui.json b/simpeg_drivers-assets/uijson/magnetic_vector_forward.ui.json index 1bb7aa4f..3c48abb6 100644 --- a/simpeg_drivers-assets/uijson/magnetic_vector_forward.ui.json +++ b/simpeg_drivers-assets/uijson/magnetic_vector_forward.ui.json @@ -1,5 +1,5 @@ { - "version": "0.3.0-alpha.6", + "version": "0.4.0", "title": "Magnetic Vector (MVI) Forward", "icon": "surveyairbornemagnetics", "documentation": "https://mirageoscience-simpeg-drivers.readthedocs-hosted.com/en/latest/", @@ -67,7 +67,7 @@ "optional": true, "enabled": false, "label": "Elevation channel", - "tooltip": "Set elevation from channel. If not set the topography will be set from the geometry of the selected 'topography' object", + "tooltip": "Set elevation from channel. If not set the topography will be set from the geometry of the selected 'topography' object", "parent": "topography_object", "dependency": "topography_object", "dependencyType": "enabled", @@ -87,7 +87,7 @@ "dependency": "topography_object", "dependencyType": "disabled", "label": "Active model", - "tooltip": "Provide the active cell boolean model directly if topography not set", + "tooltip": "Provide the active cell Boolean model directly if topography not set", "parent": "mesh", "value": "" }, diff --git a/simpeg_drivers-assets/uijson/magnetic_vector_inversion.ui.json b/simpeg_drivers-assets/uijson/magnetic_vector_inversion.ui.json index 291154bc..084387d9 100644 --- a/simpeg_drivers-assets/uijson/magnetic_vector_inversion.ui.json +++ b/simpeg_drivers-assets/uijson/magnetic_vector_inversion.ui.json @@ -1,5 +1,5 @@ { - "version": "0.3.0-beta.1", + "version": "0.4.0", "title": "Magnetic Vector (MVI) Inversion", "icon": "surveyairbornemagnetics", "documentation": "https://mirageoscience-simpeg-drivers.readthedocs-hosted.com/en/latest/", @@ -520,7 +520,7 @@ "optional": true, "enabled": false, "label": "Elevation channel", - "tooltip": "Set elevation from channel. If not set the topography will be set from the geometry of the selected 'topography' object", + "tooltip": "Set elevation from channel. If not set the topography will be set from the geometry of the selected 'topography' object", "parent": "topography_object", "dependency": "topography_object", "dependencyType": "enabled", @@ -540,7 +540,7 @@ "dependency": "topography_object", "dependencyType": "disabled", "label": "Active model", - "tooltip": "Provide the active cell boolean model directly if topography not set", + "tooltip": "Provide the active cell Boolean model directly if topography not set", "parent": "mesh", "value": "" }, @@ -794,7 +794,7 @@ "min": 1, "enabled": true, "verbose": 3, - "tooltip": "Perform an Armijo backtracking linesearch for the provided number of iterations" + "tooltip": "Perform an Armijo backtracking line search for the provided number of iterations" }, "max_cg_iterations": { "min": 0, diff --git a/simpeg_drivers-assets/uijson/magnetotellurics_forward.ui.json b/simpeg_drivers-assets/uijson/magnetotellurics_forward.ui.json index db42dc4d..642c7d74 100644 --- a/simpeg_drivers-assets/uijson/magnetotellurics_forward.ui.json +++ b/simpeg_drivers-assets/uijson/magnetotellurics_forward.ui.json @@ -1,5 +1,5 @@ { - "version": "0.3.0-alpha.6", + "version": "0.4.0", "title": "Magnetotellurics (MT) Forward", "icon": "surveymagnetotellurics", "documentation": "https://mirageoscience-simpeg-drivers.readthedocs-hosted.com/en/latest/", @@ -134,7 +134,7 @@ "optional": true, "enabled": false, "label": "Elevation channel", - "tooltip": "Set elevation from channel. If not set the topography will be set from the geometry of the selected 'topography' object", + "tooltip": "Set elevation from channel. If not set the topography will be set from the geometry of the selected 'topography' object", "parent": "topography_object", "dependency": "topography_object", "dependencyType": "enabled", @@ -154,7 +154,7 @@ "dependency": "topography_object", "dependencyType": "disabled", "label": "Active model", - "tooltip": "Provide the active cell boolean model directly if topography not set", + "tooltip": "Provide the active cell Boolean model directly if topography not set", "parent": "mesh", "value": "" }, diff --git a/simpeg_drivers-assets/uijson/magnetotellurics_inversion.ui.json b/simpeg_drivers-assets/uijson/magnetotellurics_inversion.ui.json index fdc12941..64f40d8e 100644 --- a/simpeg_drivers-assets/uijson/magnetotellurics_inversion.ui.json +++ b/simpeg_drivers-assets/uijson/magnetotellurics_inversion.ui.json @@ -1,5 +1,5 @@ { - "version": "0.3.0-alpha.6", + "version": "0.4.0", "title": "Magnetotellurics (MT) Inversion", "icon": "surveymagnetotellurics", "documentation": "https://mirageoscience-simpeg-drivers.readthedocs-hosted.com/en/latest/", @@ -374,7 +374,7 @@ "optional": true, "enabled": false, "label": "Elevation channel", - "tooltip": "Set elevation from channel. If not set the topography will be set from the geometry of the selected 'topography' object", + "tooltip": "Set elevation from channel. If not set the topography will be set from the geometry of the selected 'topography' object", "parent": "topography_object", "dependency": "topography_object", "dependencyType": "enabled", @@ -394,7 +394,7 @@ "dependency": "topography_object", "dependencyType": "disabled", "label": "Active model", - "tooltip": "Provide the active cell boolean model directly if topography not set", + "tooltip": "Provide the active cell Boolean model directly if topography not set", "parent": "mesh", "value": "" }, @@ -649,7 +649,7 @@ "min": 1, "enabled": true, "verbose": 3, - "tooltip": "Perform an Armijo backtracking linesearch for the provided number of iterations" + "tooltip": "Perform an Armijo backtracking line search for the provided number of iterations" }, "max_cg_iterations": { "min": 0, diff --git a/simpeg_drivers-assets/uijson/plate_simulation.ui.json b/simpeg_drivers-assets/uijson/plate_simulation.ui.json index af639c88..681b0a1b 100644 --- a/simpeg_drivers-assets/uijson/plate_simulation.ui.json +++ b/simpeg_drivers-assets/uijson/plate_simulation.ui.json @@ -1,8 +1,8 @@ { - "version": "0.2.0-alpha.1", - "title": "Plate simulation", + "version": "0.4.0", + "title": "Plate Simulation", "icon": "maxwellplate", - "documentation": "https://mirageoscience-plate-simulation.readthedocs-hosted.com/en/latest/", + "documentation": "https://mirageoscience-simpeg-drivers.readthedocs-hosted.com/en/latest/plate-simulation/", "conda_environment": "simpeg_drivers", "run_command": "simpeg_drivers.driver", "geoh5": "", @@ -57,7 +57,7 @@ "label": "Number of plates", "value": 1, "enabled": true, - "tooltip": "If more than one the plates will be parallel, equally spaced over the center of the model" + "tooltip": "If more than one the plates will be parallel, equally spaced over the centre of the model" }, "spacing": { "main": true, @@ -125,7 +125,7 @@ "group": "Plate", "value": true, "enabled": true, - "tooltip": "If checked locations are relative to the survey center and either topography or overburden in z according to 'Depth reference' selection" + "tooltip": "If checked locations are relative to the survey centre and either topography or overburden in z according to 'Depth reference' selection" }, "easting": { "label": "Easting (m)", @@ -133,7 +133,7 @@ "main": true, "value": 0.0, "enabled": true, - "tooltip": "If relative locations, Easting is relative to the center of the survey" + "tooltip": "If relative locations, Easting is relative to the centre of the survey" }, "northing": { "label": "Northing (m)", @@ -141,7 +141,7 @@ "group": "Plate", "value": 0.0, "enabled": true, - "tooltip": "If relative locations, Northing is relative to the center of the survey" + "tooltip": "If relative locations, Northing is relative to the centre of the survey" }, "elevation": { "label": "Elevation (m)", diff --git a/simpeg_drivers-assets/uijson/plate_sweep.ui.json b/simpeg_drivers-assets/uijson/plate_sweep.ui.json index 9d72ef1f..2112815e 100644 --- a/simpeg_drivers-assets/uijson/plate_sweep.ui.json +++ b/simpeg_drivers-assets/uijson/plate_sweep.ui.json @@ -2,7 +2,7 @@ "version": "0.2.0-alpha.1", "title": "Plate Sweep", "icon": "maxwellplate", - "documentation": "https://mirageoscience-plate-simulation.readthedocs-hosted.com/en/latest/", + "documentation": "https://mirageoscience-simpeg-drivers.readthedocs-hosted.com/en/latest/plate-simulation/", "conda_environment": "simpeg_drivers", "run_command": "simpeg_drivers.driver", "geoh5": "", diff --git a/simpeg_drivers-assets/uijson/sensitivity_cutoff.ui.json b/simpeg_drivers-assets/uijson/sensitivity_cutoff.ui.json index 9d2f77bc..d98de32e 100644 --- a/simpeg_drivers-assets/uijson/sensitivity_cutoff.ui.json +++ b/simpeg_drivers-assets/uijson/sensitivity_cutoff.ui.json @@ -2,7 +2,7 @@ "version": "0.3.0-beta.1", "title": "Depth of Investigation", "icon": "grd", - "documentation": "https://mirageoscience-simpeg-drivers.readthedocs-hosted.com/en/latest/inversion/depth_of_investigation.html#depth-of-investigation", + "documentation": "https://mirageoscience-simpeg-drivers.readthedocs-hosted.com/en/latest/fundamentals/depth_of_investigation.html", "conda_environment": "simpeg_drivers", "run_command": "simpeg_drivers.depth_of_investigation.sensitivity_cutoff.driver", "geoh5": "", diff --git a/simpeg_drivers-assets/uijson/tdem1d_forward.ui.json b/simpeg_drivers-assets/uijson/tdem1d_forward.ui.json index b2bd3b13..134fcce0 100644 --- a/simpeg_drivers-assets/uijson/tdem1d_forward.ui.json +++ b/simpeg_drivers-assets/uijson/tdem1d_forward.ui.json @@ -1,5 +1,5 @@ { - "version": "0.3.0-alpha.6", + "version": "0.4.0", "title": "Time-domain EM (TEM) 1D Forward", "icon": "surveyairborneem", "documentation": "https://mirageoscience-simpeg-drivers.readthedocs-hosted.com/en/latest/", @@ -31,10 +31,11 @@ "main": true, "label": "Data type", "tooltip": [ - "Set the units of the data.
", - "Data are expected to be normalized by the source strength, dependent on the type:
", - "
Dipole
Current * area * number of turns (NIA).
", - "
Wire
Current * number of turns (NI).
" + "Set the units of the data.

", + "Data are expected to be normalized by the source strength, dependent on the type:

", + "
Dipole
Current * area * number of turns (NIA).
", + "
Wire
Current * number of turns (NI).
", + "
" ], "value": "dB/dt (T/s)" }, @@ -146,7 +147,7 @@ "optional": true, "enabled": false, "label": "Elevation channel", - "tooltip": "Set elevation from channel. If not set the topography will be set from the geometry of the selected 'topography' object", + "tooltip": "Set elevation from channel. If not set the topography will be set from the geometry of the selected 'topography' object", "parent": "topography_object", "dependency": "topography_object", "dependencyType": "enabled", @@ -167,7 +168,7 @@ "dependency": "topography_object", "dependencyType": "disabled", "label": "Active model", - "tooltip": "Provide the active cell boolean model directly if topography not set", + "tooltip": "Provide the active cell Boolean model directly if topography not set", "parent": "mesh", "value": "" }, diff --git a/simpeg_drivers-assets/uijson/tdem1d_inversion.ui.json b/simpeg_drivers-assets/uijson/tdem1d_inversion.ui.json index f06c6861..77eebdca 100644 --- a/simpeg_drivers-assets/uijson/tdem1d_inversion.ui.json +++ b/simpeg_drivers-assets/uijson/tdem1d_inversion.ui.json @@ -1,5 +1,5 @@ { - "version": "0.3.0-alpha.6", + "version": "0.4.0", "title": "Time-domain EM (TEM) 1D Inversion", "icon": "surveyairborneem", "documentation": "https://mirageoscience-simpeg-drivers.readthedocs-hosted.com/en/latest/", @@ -31,10 +31,11 @@ "main": true, "label": "Data type", "tooltip": [ - "Set the units of the data.
", - "Data are expected to be normalized by the source strength, dependent on the type:
", - "
Dipole
Current * area * number of turns (NIA).
", - "
Wire
Current * number of turns (NI).
" + "Set the units of the data.

", + "Data are expected to be normalized by the source strength, dependent on the type:

", + "
Dipole
Current * area * number of turns (NIA).
", + "
Wire
Current * number of turns (NI).
", + "
" ], "value": "dB/dt (T/s)" }, @@ -212,7 +213,7 @@ "optional": true, "enabled": false, "label": "Elevation channel", - "tooltip": "Set elevation from channel. If not set the topography will be set from the geometry of the selected 'topography' object", + "tooltip": "Set elevation from channel. If not set the topography will be set from the geometry of the selected 'topography' object", "parent": "topography_object", "dependency": "topography_object", "dependencyType": "enabled", @@ -233,7 +234,7 @@ "dependency": "topography_object", "dependencyType": "disabled", "label": "Active model", - "tooltip": "Provide the active cell boolean model directly if topography not set", + "tooltip": "Provide the active cell Boolean model directly if topography not set", "parent": "mesh", "value": "" }, @@ -447,7 +448,7 @@ "min": 1, "enabled": true, "verbose": 3, - "tooltip": "Perform an Armijo backtracking linesearch for the provided number of iterations" + "tooltip": "Perform an Armijo backtracking line search for the provided number of iterations" }, "max_cg_iterations": { "min": 0, diff --git a/simpeg_drivers-assets/uijson/tdem_forward.ui.json b/simpeg_drivers-assets/uijson/tdem_forward.ui.json index a67ff175..f46567a5 100644 --- a/simpeg_drivers-assets/uijson/tdem_forward.ui.json +++ b/simpeg_drivers-assets/uijson/tdem_forward.ui.json @@ -1,5 +1,5 @@ { - "version": "0.3.0-alpha.6", + "version": "0.4.0", "title": "Time-domain EM (TEM) Forward", "icon": "surveyairborneem", "documentation": "https://mirageoscience-simpeg-drivers.readthedocs-hosted.com/en/latest/", @@ -31,10 +31,11 @@ "main": true, "label": "Data type", "tooltip": [ - "Set the units of the data.
", - "Data are expected to be normalized by the source strength, dependent on the type:
", - "
Dipole
Current * area * number of turns (NIA).
", - "
Wire
Current * number of turns (NI).
" + "Set the units of the data.

", + "Data are expected to be normalized by the source strength, dependent on the type:

", + "
Dipole
Current * area * number of turns (NIA).
", + "
Wire
Current * number of turns (NI).
", + "
" ], "value": "dB/dt (T/s)" }, @@ -118,7 +119,7 @@ "optional": true, "enabled": false, "label": "Elevation channel", - "tooltip": "Set elevation from channel. If not set the topography will be set from the geometry of the selected 'topography' object", + "tooltip": "Set elevation from channel. If not set the topography will be set from the geometry of the selected 'topography' object", "parent": "topography_object", "dependency": "topography_object", "dependencyType": "enabled", @@ -138,7 +139,7 @@ "dependency": "topography_object", "dependencyType": "disabled", "label": "Active model", - "tooltip": "Provide the active cell boolean model directly if topography not set", + "tooltip": "Provide the active cell Boolean model directly if topography not set", "parent": "mesh", "value": "" }, diff --git a/simpeg_drivers-assets/uijson/tdem_inversion.ui.json b/simpeg_drivers-assets/uijson/tdem_inversion.ui.json index c0fa0529..126d44e0 100644 --- a/simpeg_drivers-assets/uijson/tdem_inversion.ui.json +++ b/simpeg_drivers-assets/uijson/tdem_inversion.ui.json @@ -1,5 +1,5 @@ { - "version": "0.3.0-beta.1", + "version": "0.4.0", "title": "Time-domain EM (TEM) Inversion", "icon": "surveyairborneem", "documentation": "https://mirageoscience-simpeg-drivers.readthedocs-hosted.com/en/latest/", @@ -31,10 +31,11 @@ "main": true, "label": "Data type", "tooltip": [ - "Set the units of the data.
", - "Data are expected to be normalized by the source strength, dependent on the type:
", - "
Dipole
Current * area * number of turns (NIA).
", - "
Wire
Current * number of turns (NI).
" + "Set the units of the data.

", + "Data are expected to be normalized by the source strength, dependent on the type:

", + "
Dipole
Current * area * number of turns (NIA).
", + "
Wire
Current * number of turns (NI).
", + "
" ], "value": "dB/dt (T/s)" }, @@ -232,7 +233,7 @@ "optional": true, "enabled": false, "label": "Elevation channel", - "tooltip": "Set elevation from channel. If not set the topography will be set from the geometry of the selected 'topography' object", + "tooltip": "Set elevation from channel. If not set the topography will be set from the geometry of the selected 'topography' object", "parent": "topography_object", "dependency": "topography_object", "dependencyType": "enabled", @@ -252,7 +253,7 @@ "dependency": "topography_object", "dependencyType": "disabled", "label": "Active model", - "tooltip": "Provide the active cell boolean model directly if topography not set", + "tooltip": "Provide the active cell Boolean model directly if topography not set", "parent": "mesh", "value": "" }, @@ -507,7 +508,7 @@ "min": 1, "enabled": true, "verbose": 3, - "tooltip": "Perform an Armijo backtracking linesearch for the provided number of iterations" + "tooltip": "Perform an Armijo backtracking line search for the provided number of iterations" }, "max_cg_iterations": { "min": 0, diff --git a/simpeg_drivers-assets/uijson/tile_estimator.ui.json b/simpeg_drivers-assets/uijson/tile_estimator.ui.json index 19726fa4..d63bdc22 100644 --- a/simpeg_drivers-assets/uijson/tile_estimator.ui.json +++ b/simpeg_drivers-assets/uijson/tile_estimator.ui.json @@ -16,13 +16,5 @@ "main": true, "label": "Create plot", "value": true - }, - "out_group": { - "label": "UIJson group", - "value": "", - "groupType": "{BB50AC61-A657-4926-9C82-067658E246A0}", - "optional": true, - "enabled": false, - "tooltip": "Assign a group to which results will be saved" } } diff --git a/simpeg_drivers-assets/uijson/tipper_forward.ui.json b/simpeg_drivers-assets/uijson/tipper_forward.ui.json index 4a49198e..2c73996a 100644 --- a/simpeg_drivers-assets/uijson/tipper_forward.ui.json +++ b/simpeg_drivers-assets/uijson/tipper_forward.ui.json @@ -1,5 +1,5 @@ { - "version": "0.3.0-alpha.6", + "version": "0.4.0", "title": "Tipper Forward", "icon": "surveyztem", "documentation": "https://mirageoscience-simpeg-drivers.readthedocs-hosted.com/en/latest/", @@ -110,7 +110,7 @@ "optional": true, "enabled": false, "label": "Elevation channel", - "tooltip": "Set elevation from channel. If not set the topography will be set from the geometry of the selected 'topography' object", + "tooltip": "Set elevation from channel. If not set the topography will be set from the geometry of the selected 'topography' object", "parent": "topography_object", "dependency": "topography_object", "dependencyType": "enabled", @@ -130,7 +130,7 @@ "dependency": "topography_object", "dependencyType": "disabled", "label": "Active model", - "tooltip": "Provide the active cell boolean model directly if topography not set", + "tooltip": "Provide the active cell Boolean model directly if topography not set", "parent": "mesh", "value": "" }, diff --git a/simpeg_drivers-assets/uijson/tipper_inversion.ui.json b/simpeg_drivers-assets/uijson/tipper_inversion.ui.json index 315811e3..ecd58b39 100644 --- a/simpeg_drivers-assets/uijson/tipper_inversion.ui.json +++ b/simpeg_drivers-assets/uijson/tipper_inversion.ui.json @@ -1,5 +1,5 @@ { - "version": "0.3.0-alpha.6", + "version": "0.4.0", "title": "Tipper Inversion", "icon": "surveyztem", "documentation": "https://mirageoscience-simpeg-drivers.readthedocs-hosted.com/en/latest/", @@ -254,7 +254,7 @@ "optional": true, "enabled": false, "label": "Elevation channel", - "tooltip": "Set elevation from channel. If not set the topography will be set from the geometry of the selected 'topography' object", + "tooltip": "Set elevation from channel. If not set the topography will be set from the geometry of the selected 'topography' object", "parent": "topography_object", "dependency": "topography_object", "dependencyType": "enabled", @@ -274,7 +274,7 @@ "dependency": "topography_object", "dependencyType": "disabled", "label": "Active model", - "tooltip": "Provide the active cell boolean model directly if topography not set", + "tooltip": "Provide the active cell Boolean model directly if topography not set", "parent": "mesh", "value": "" }, @@ -529,7 +529,7 @@ "min": 1, "enabled": true, "verbose": 3, - "tooltip": "Perform an Armijo backtracking linesearch for the provided number of iterations" + "tooltip": "Perform an Armijo backtracking line search for the provided number of iterations" }, "max_cg_iterations": { "min": 0, diff --git a/simpeg_drivers/components/factories/directives_factory.py b/simpeg_drivers/components/factories/directives_factory.py index 04250362..74304323 100644 --- a/simpeg_drivers/components/factories/directives_factory.py +++ b/simpeg_drivers/components/factories/directives_factory.py @@ -25,7 +25,7 @@ from simpeg.utils.mat_utils import cartesian2amplitude_dip_azimuth from simpeg_drivers.components.factories.simpeg_factory import SimPEGFactory -from simpeg_drivers.options import BaseInversionOptions +from simpeg_drivers.options import BaseInversionOptions, ModelTypeEnum if TYPE_CHECKING: @@ -418,7 +418,7 @@ def assemble_keyword_arguments( inversion_object.permutation.T, ] - if self.params.models.model_type == "Resistivity (Ohm-m)": + if self.params.models.model_type == ModelTypeEnum.resistivity: kwargs["transforms"].append(lambda x: 1 / x) if "1d" in self.factory_type: diff --git a/simpeg_drivers/components/factories/source_factory.py b/simpeg_drivers/components/factories/source_factory.py index 0b0077ac..f9abbed9 100644 --- a/simpeg_drivers/components/factories/source_factory.py +++ b/simpeg_drivers/components/factories/source_factory.py @@ -24,6 +24,7 @@ from geoh5py.objects import LargeLoopGroundTEMReceivers from simpeg_drivers.components.factories.simpeg_factory import SimPEGFactory +from simpeg_drivers.options import ModelTypeEnum if TYPE_CHECKING: @@ -138,7 +139,10 @@ def assemble_keyword_arguments( # pylint: disable=arguments-differ if self.factory_type in ["magnetotellurics", "tipper"]: background = deepcopy(self.params.models.conductivity_model) - if getattr(self.params.models, "model_type", None) == "Resistivity (Ohm-m)": + if ( + getattr(self.params.models, "model_type", None) + == ModelTypeEnum.resistivity + ): background **= -1.0 kwargs["sigma_primary"] = [background] diff --git a/simpeg_drivers/components/models.py b/simpeg_drivers/components/models.py index d10df22b..2f3f69d5 100644 --- a/simpeg_drivers/components/models.py +++ b/simpeg_drivers/components/models.py @@ -24,6 +24,8 @@ mkvc, ) +from simpeg_drivers.options import ModelTypeEnum + if TYPE_CHECKING: from simpeg_drivers.driver import InversionDriver @@ -165,7 +167,7 @@ def starting_model(self) -> np.ndarray | None: mstart = self._starting_model.model.copy() if mstart is not None and self.is_sigma: - if self.driver.params.models.model_type == "Resistivity (Ohm-m)": + if self.driver.params.models.model_type == ModelTypeEnum.resistivity: mstart = 1 / mstart mstart = np.log(mstart) @@ -221,7 +223,7 @@ def reference_model(self) -> np.ndarray | None: ref_model = mref.copy() if self.is_sigma: - if self.driver.params.models.model_type == "Resistivity (Ohm-m)": + if self.driver.params.models.model_type == ModelTypeEnum.resistivity: ref_model = 1 / ref_model ref_model = np.log(ref_model) @@ -263,7 +265,7 @@ def reference_declination(self) -> np.ndarray | None: def lower_bound(self) -> np.ndarray | None: if ( self.is_sigma - and self.driver.params.models.model_type == "Resistivity (Ohm-m)" + and self.driver.params.models.model_type == ModelTypeEnum.resistivity ): bound_model = self._upper_bound.model else: @@ -283,7 +285,7 @@ def lower_bound(self) -> np.ndarray | None: if self.is_sigma: is_finite = np.isfinite(lbound) - if self.driver.params.models.model_type == "Resistivity (Ohm-m)": + if self.driver.params.models.model_type == ModelTypeEnum.resistivity: lbound[is_finite] = 1 / lbound[is_finite] lbound[is_finite] = np.log(lbound[is_finite]) @@ -297,7 +299,7 @@ def lower_bound(self) -> np.ndarray | None: def upper_bound(self) -> np.ndarray | None: if ( self.is_sigma - and self.driver.params.models.model_type == "Resistivity (Ohm-m)" + and self.driver.params.models.model_type == ModelTypeEnum.resistivity ): bound_model = self._lower_bound.model else: @@ -311,7 +313,7 @@ def upper_bound(self) -> np.ndarray | None: if self.is_sigma: is_finite = np.isfinite(ubound) - if self.driver.params.models.model_type == "Resistivity (Ohm-m)": + if self.driver.params.models.model_type == ModelTypeEnum.resistivity: ubound[is_finite] = 1 / ubound[is_finite] ubound[is_finite] = np.log(ubound[is_finite]) @@ -329,7 +331,7 @@ def conductivity_model(self) -> np.ndarray | None: background_sigma = self._conductivity_model.model.copy() if background_sigma is not None: - if self.driver.params.models.model_type == "Resistivity (Ohm-m)": + if self.driver.params.models.model_type == ModelTypeEnum.resistivity: background_sigma = 1 / background_sigma # Don't apply log if IP inversion @@ -569,7 +571,7 @@ def save_model(self): model_type = self.model_type if ( model_type == "conductivity_model" - and self.driver.params.models.model_type == "Resistivity (Ohm-m)" + and self.driver.params.models.model_type == ModelTypeEnum.resistivity ): model_type = "resistivity_model" @@ -588,11 +590,11 @@ def save_model(self): def edit_ndv_model(self, model): """Change values to NDV on models and save to workspace.""" + model_type = self.model_type if ( - model_type == "conductivity_model" - and getattr(self.driver.params.models, "model_type", None) - == "Resistivity (Ohm-m)" + getattr(self.driver.params.models, "model_type", None) + == ModelTypeEnum.resistivity ): model_type = "resistivity_model" diff --git a/simpeg_drivers/joint/driver.py b/simpeg_drivers/joint/driver.py index bc93f59e..de308714 100644 --- a/simpeg_drivers/joint/driver.py +++ b/simpeg_drivers/joint/driver.py @@ -38,6 +38,7 @@ ) from simpeg_drivers.driver import InversionDriver from simpeg_drivers.joint.options import BaseJointOptions +from simpeg_drivers.options import ModelTypeEnum from simpeg_drivers.utils.utils import simpeg_group_to_driver @@ -451,7 +452,10 @@ def _get_local_model_save_directives( ) model_directive.label = driver.params.physical_property - if getattr(driver.params.models, "model_type", None) == "Resistivity (Ohm-m)": + if ( + getattr(driver.params.models, "model_type", None) + == ModelTypeEnum.resistivity + ): model_directive.label = "resistivity_model" model_directive.transforms = [wire, *model_directive.transforms] diff --git a/simpeg_drivers/joint/joint_surveys/driver.py b/simpeg_drivers/joint/joint_surveys/driver.py index c0906560..eb912c18 100644 --- a/simpeg_drivers/joint/joint_surveys/driver.py +++ b/simpeg_drivers/joint/joint_surveys/driver.py @@ -14,12 +14,12 @@ from logging import getLogger import numpy as np -from geoh5py.groups.property_group_type import GroupTypeEnum from geoh5py.shared.utils import fetch_active_workspace from simpeg import maps from simpeg_drivers.driver import InversionDriver from simpeg_drivers.joint.driver import BaseJointDriver +from simpeg_drivers.options import ModelTypeEnum from .options import JointSurveysOptions @@ -64,7 +64,7 @@ def validate_create_models(self): model = np.exp(model) if ( getattr(self.params.models, "model_type", None) - == "Resistivity (Ohm-m)" + == ModelTypeEnum.resistivity ): model = 1.0 / model diff --git a/simpeg_drivers/joint/joint_surveys/options.py b/simpeg_drivers/joint/joint_surveys/options.py index 037c9ab2..b80a3bd4 100644 --- a/simpeg_drivers/joint/joint_surveys/options.py +++ b/simpeg_drivers/joint/joint_surveys/options.py @@ -14,12 +14,26 @@ from pathlib import Path from typing import ClassVar -from geoapps_utils.utils.importing import GeoAppsError -from pydantic import model_validator +from geoh5py.data import FloatData +from pydantic import field_validator, model_validator from simpeg_drivers import assets_path -from simpeg_drivers.joint.options import BaseJointOptions -from simpeg_drivers.options import ConductivityModelOptions +from simpeg_drivers.joint.options import BaseJointOptions, JointModelOptions +from simpeg_drivers.options import ModelTypeEnum + + +class JointSurveysModelOptions(JointModelOptions): + """ + Joint Surveys model options. + + :param model_type: The physical property type for the inversion. + :param starting_model: The starting model for the inversion. + :param reference_model: The reference model for the inversion. + """ + + model_type: ModelTypeEnum = ModelTypeEnum.conductivity + starting_model: float | FloatData | None = None + reference_model: float | FloatData | None = None class JointSurveysOptions(BaseJointOptions): @@ -33,7 +47,20 @@ class JointSurveysOptions(BaseJointOptions): title: str = "Joint Surveys Inversion" inversion_type: str = "joint surveys" - models: ConductivityModelOptions + models: JointSurveysModelOptions + + @field_validator("group_a", "group_b", "group_c") + @classmethod + def no_mvi_groups(cls, val): + if val is None: + return val + + if "magnetic vector" in val.options.get("inversion_type", ""): + raise ValueError( + f"Joint inversion doesn't currently support MVI data as passed in " + f"the group: {val.name}." + ) + return val @model_validator(mode="after") def all_groups_same_physical_property(self): diff --git a/simpeg_drivers/line_sweep/driver.py b/simpeg_drivers/line_sweep/driver.py index 1e5a7f84..b726e90a 100644 --- a/simpeg_drivers/line_sweep/driver.py +++ b/simpeg_drivers/line_sweep/driver.py @@ -69,9 +69,11 @@ def validate_out_group(self, out_group: SimPEGGroup | None) -> SimPEGGroup: return out_group with fetch_active_workspace(self.workspace, mode="r+"): - out_group = SimPEGGroup.create( - self.workspace, name=self.batch2d_params.title - ) + out_group = self.workspace.get_entity(self.batch2d_params.title)[0] + if out_group is None: + out_group = SimPEGGroup.create( + self.workspace, name=self.batch2d_params.title + ) return out_group diff --git a/simpeg_drivers/options.py b/simpeg_drivers/options.py index 6622da12..21b1b357 100644 --- a/simpeg_drivers/options.py +++ b/simpeg_drivers/options.py @@ -11,6 +11,7 @@ from __future__ import annotations +from enum import Enum from logging import getLogger from pathlib import Path from typing import Annotated, Any, ClassVar, Literal, TypeAlias @@ -324,14 +325,17 @@ def gradient_orientations(self) -> tuple(float, float): return self._gradient_orientations +class ModelTypeEnum(str, Enum): + conductivity = "Conductivity (S/m)" + resistivity = "Resistivity (Ohm-m)" + + class ConductivityModelOptions(ModelOptions): """ Options for the conductivity model used in all of EM methods. """ - model_type: Literal["Conductivity (S/m)", "Resistivity (Ohm-m)"] = ( - "Conductivity (S/m)" - ) + model_type: ModelTypeEnum = ModelTypeEnum.conductivity conductivity_model: float | FloatData | None = Field( None, validation_alias=AliasChoices("background_conductivity", "conductivity_model"), diff --git a/simpeg_drivers/plate_simulation/driver.py b/simpeg_drivers/plate_simulation/driver.py index b7dd61c0..d3f62c59 100644 --- a/simpeg_drivers/plate_simulation/driver.py +++ b/simpeg_drivers/plate_simulation/driver.py @@ -21,11 +21,10 @@ from geoh5py.groups import SimPEGGroup from geoh5py.objects import Octree, Points, Surface from geoh5py.shared.utils import fetch_active_workspace, stringify -from geoh5py.ui_json import InputFile, monitored_directory_copy from grid_apps.octree_creation.driver import OctreeDriver from simpeg_drivers.driver import BaseDriver, InversionDriver -from simpeg_drivers.options import BaseForwardOptions +from simpeg_drivers.options import BaseForwardOptions, ModelTypeEnum from simpeg_drivers.plate_simulation.models.events import Anomaly, Erosion, Overburden from simpeg_drivers.plate_simulation.models.parametric import Plate from simpeg_drivers.plate_simulation.models.series import DikeSwarm, Geology @@ -137,7 +136,9 @@ def simulation_parameters(self) -> BaseForwardOptions: if self._simulation_parameters is None: self._simulation_parameters = self.params.simulation_parameters() if self._simulation_parameters.physical_property == "conductivity": - self._simulation_parameters.models.model_type = "Resistivity (Ohm-m)" + self._simulation_parameters.models.model_type = ( + ModelTypeEnum.resistivity + ) return self._simulation_parameters @property diff --git a/tests/smoke_test.py b/tests/smoke_test.py new file mode 100644 index 00000000..9fce01ba --- /dev/null +++ b/tests/smoke_test.py @@ -0,0 +1,19 @@ +# ''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''' +# Copyright (c) 2025 Mira Geoscience Ltd. ' +# ' +# This file is part of simpeg-drivers package. ' +# ' +# simpeg-drivers is distributed under the terms and conditions of the MIT License ' +# (see LICENSE file at the root of this source code package). ' +# ' +# ''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''''' + +import importlib +import types + + +def test_import_package(): + """Simple smoke test to ensure the package imports without errors.""" + + mod = importlib.import_module("simpeg_drivers") + assert isinstance(mod, types.ModuleType) diff --git a/tests/version_test.py b/tests/version_test.py index 5e8051d2..624950ff 100644 --- a/tests/version_test.py +++ b/tests/version_test.py @@ -12,16 +12,25 @@ from __future__ import annotations import importlib +import json +import re from pathlib import Path import pytest import yaml -from packaging.version import InvalidVersion, Version +from packaging.version import Version import simpeg_drivers -def get_conda_recipe_version(): +def _get_json_version() -> str: + version_json_path = Path(__file__).resolve().parents[1] / "_version.json" + with version_json_path.open(encoding="utf-8") as file: + version_json = json.load(file) + return version_json["version"] + + +def _get_conda_recipe_version_def() -> str: recipe_path = Path(__file__).resolve().parents[1] / "recipe.yaml" with recipe_path.open(encoding="utf-8") as file: @@ -29,12 +38,6 @@ def get_conda_recipe_version(): return recipe["context"]["version"] -def test_version_is_consistent(): - project_version = Version(simpeg_drivers.__version__) - conda_version = Version(get_conda_recipe_version()) - assert conda_version.base_version == project_version.base_version - - def _version_module_exists(): try: importlib.import_module("simpeg_drivers._version") @@ -43,6 +46,13 @@ def _version_module_exists(): return False +def test_conda_recipe_version_loads_json(): + conda_version_def = _get_conda_recipe_version_def() + regex = r"\$\{\{\s*load_from_file\(\s*['\"](_version\.json)['\"]\s*\)\s*\.version\b.*\}\}" + regex_match = re.match(regex, conda_version_def) + assert regex_match is not None + + @pytest.mark.skipif( _version_module_exists(), reason="simpeg_drivers._version can be found: package is built", @@ -60,28 +70,7 @@ def test_fallback_version_is_zero(): not _version_module_exists(), reason="simpeg_drivers._version cannot be found: uses a fallback version", ) -def test_conda_version_is_consistent(): +def test_version_json_is_consistent(): project_version = Version(simpeg_drivers.__version__) - conda_version = Version(get_conda_recipe_version()) - - assert conda_version.is_devrelease == project_version.is_devrelease - assert conda_version.is_prerelease == project_version.is_prerelease - assert conda_version.is_postrelease == project_version.is_postrelease - assert conda_version == project_version - - -def test_conda_version_is_pep440(): - version = Version(get_conda_recipe_version()) - assert version is not None - - -def validate_version(version_str): - try: - version = Version(version_str) - return (version.major, version.minor, version.micro, version.pre, version.post) - except InvalidVersion: - return None - - -def test_version_is_valid(): - assert validate_version(simpeg_drivers.__version__) is not None + json_version = Version(_get_json_version()) + assert project_version == json_version