Skip to content

[FEATURE] <Short description of the feature> #125

@mattloose

Description

@mattloose

⚠️ Reminder

ROBIN is developed for RESEARCH USE ONLY.


📝 Description

ROBIN needs to report if it encounters a bam file without methylation information within it.

🎯 Use Case

A user may accidentally not set methylation calling when base calling - this will prevent classification.

🔧 Proposed Solution

ROBIN can check each BAM file for the appropriate methylation tag -- as soon as it is seen we know the BAM file is good.

🚫 Alternatives Considered

Assuming the user has configured things correctly is bad practice. We could directly query the MinKNOW API to address this issue but that assumes robin is running on the machine sequencing.

⚙️ Additional Context

Add any other context, examples, or screenshots related to your feature request.

Metadata

Metadata

Assignees

No one assigned

    Labels

    enhancementNew feature or request

    Type

    No type

    Projects

    No projects

    Milestone

    No milestone

    Relationships

    None yet

    Development

    No branches or pull requests

    Issue actions