Unable to get DUPL command to work correctly #4
Description
Hello,
I am unable to get the DUPL command to work correctly when attempting to use it to make a repeating duplication on hg19.
I am interested repeating a certain 3-base portion of the hg19 WGS 16 times (just as an example), inserting these repetitions immediately after the selected portion.
An example of the command.sim that I am using is:
DUPL chrX 66765222 66765225
Executed with the command:
SVsim -i command.sim -W -n 16 -d -r hg19.fasta -o example_output.fasta
What I am getting as an output is that single base at 66765225 is being being duplicated and inserted to the right a single time. I've been able to insert sequences successfully with the INSL command but can't seem to figure out DUPL - is there some way I am approaching this wrong?
Thank you in advance.