From 70c8f84dc24f81752589a08ee4fb908b2f0dc6e2 Mon Sep 17 00:00:00 2001 From: hmc-cs-bbaker Date: Wed, 22 May 2024 15:10:31 -0700 Subject: [PATCH 1/7] downgrade torch --- setup.py | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/setup.py b/setup.py index 38e2fcc0..c74cad3b 100644 --- a/setup.py +++ b/setup.py @@ -1,10 +1,10 @@ from setuptools import setup, find_packages setup(name='rfdiffusion', - version='1.1.0', + version='1.1.1', description='RFdiffusion is an open source method for protein structure generation.', author='Rosetta Commons', url='https://github.com/RosettaCommons/RFdiffusion', scripts=["scripts/run_inference.py"], packages=find_packages(), - install_requires=['torch==2.1.2', 'se3-transformer']) + install_requires=['torch==2.0.1', 'se3-transformer']) From 4d850cf23da819e176f29470fe3ebcb77119e8bb Mon Sep 17 00:00:00 2001 From: hmc-cs-bbaker Date: Wed, 22 May 2024 15:15:10 -0700 Subject: [PATCH 2/7] different version --- setup.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/setup.py b/setup.py index c74cad3b..6cdbca87 100644 --- a/setup.py +++ b/setup.py @@ -7,4 +7,4 @@ url='https://github.com/RosettaCommons/RFdiffusion', scripts=["scripts/run_inference.py"], packages=find_packages(), - install_requires=['torch==2.0.1', 'se3-transformer']) + install_requires=['torch==2.1.0', 'se3-transformer']) From 674e4136a594a27a66b9879c23f7f30cd22dc6fc Mon Sep 17 00:00:00 2001 From: hmc-cs-bbaker Date: Wed, 22 May 2024 16:04:26 -0700 Subject: [PATCH 3/7] fix --- setup.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/setup.py b/setup.py index 6cdbca87..d81dfe01 100644 --- a/setup.py +++ b/setup.py @@ -7,4 +7,4 @@ url='https://github.com/RosettaCommons/RFdiffusion', scripts=["scripts/run_inference.py"], packages=find_packages(), - install_requires=['torch==2.1.0', 'se3-transformer']) + install_requires=['torch==2.1.0', 'se3-transformer', 'dgl==2.1.0']) From ec8a747ee43a94b15047121768d1efe10d473da9 Mon Sep 17 00:00:00 2001 From: hmc-cs-bbaker Date: Wed, 22 May 2024 17:58:32 -0700 Subject: [PATCH 4/7] fix --- setup.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/setup.py b/setup.py index d81dfe01..3ba8d618 100644 --- a/setup.py +++ b/setup.py @@ -7,4 +7,4 @@ url='https://github.com/RosettaCommons/RFdiffusion', scripts=["scripts/run_inference.py"], packages=find_packages(), - install_requires=['torch==2.1.0', 'se3-transformer', 'dgl==2.1.0']) + install_requires=['torch==2.1.0', 'se3-transformer', 'dgl==2.1.0', 'torchdata==0.7.0']) From 8533a046d1d23e872d58a6ca270ca21a230ba7a6 Mon Sep 17 00:00:00 2001 From: hmc-cs-bbaker Date: Thu, 23 May 2024 11:42:06 -0700 Subject: [PATCH 5/7] try again --- setup.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/setup.py b/setup.py index 3ba8d618..f15388fd 100644 --- a/setup.py +++ b/setup.py @@ -7,4 +7,4 @@ url='https://github.com/RosettaCommons/RFdiffusion', scripts=["scripts/run_inference.py"], packages=find_packages(), - install_requires=['torch==2.1.0', 'se3-transformer', 'dgl==2.1.0', 'torchdata==0.7.0']) + install_requires=['torch', 'se3-transformer', 'dgl==2.2.1']) From 8558c86f335cf4db02de0328ba9c9a65fb2ec799 Mon Sep 17 00:00:00 2001 From: hmc-cs-bbaker Date: Thu, 23 May 2024 11:48:18 -0700 Subject: [PATCH 6/7] fix --- setup.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/setup.py b/setup.py index f15388fd..d81dfe01 100644 --- a/setup.py +++ b/setup.py @@ -7,4 +7,4 @@ url='https://github.com/RosettaCommons/RFdiffusion', scripts=["scripts/run_inference.py"], packages=find_packages(), - install_requires=['torch', 'se3-transformer', 'dgl==2.2.1']) + install_requires=['torch==2.1.0', 'se3-transformer', 'dgl==2.1.0']) From df95a34969f97a14b7bcef29ccb7ca16756baf21 Mon Sep 17 00:00:00 2001 From: hmc-cs-bbaker Date: Thu, 23 May 2024 12:09:19 -0700 Subject: [PATCH 7/7] downgrade --- env/SE3nv.yml | 2 +- setup.py | 2 +- 2 files changed, 2 insertions(+), 2 deletions(-) diff --git a/env/SE3nv.yml b/env/SE3nv.yml index a51bcce6..f77127fa 100644 --- a/env/SE3nv.yml +++ b/env/SE3nv.yml @@ -2,7 +2,7 @@ name: SE3nv channels: - defaults - conda-forge - - pytorch + - pytorch-gpu - dglteam - nvidia dependencies: diff --git a/setup.py b/setup.py index d81dfe01..bcb0392c 100644 --- a/setup.py +++ b/setup.py @@ -7,4 +7,4 @@ url='https://github.com/RosettaCommons/RFdiffusion', scripts=["scripts/run_inference.py"], packages=find_packages(), - install_requires=['torch==2.1.0', 'se3-transformer', 'dgl==2.1.0']) + install_requires=['torch', 'se3-transformer'])